Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe05g00832 | ATGTCGCGGAAAGGTTTAATGGAGCAAGATTTAAGTAAACTGGATGTAACAAAGTTGAGTCCAACGTCCAAGGAAGTTATATCCCGTCAAGCCACCATTAACATTGGCACCATTGGTCATGTGGCACACGGCAAGTCGACAGTTGTGAAAGCAATATCTGGTGTTCAGACTGTTCGTTTTAAAAACGAGCTAGAGCGTAACATCACTATCAAGCTTGGATATGCAAATGCAAAGATATACAAATGCGAAGATGATCAATGCCCTCGACCTTTGACATACAAGGCATATGGAAGTGGAAAGGAAGACAGTCCTTTATGTGATGTGCCTGGGTTTGAAAATTGCAGGATGGAACTTCTAAGACATGTGTCTTTTGTAGATTGTCCCGGTCACGATATTCTCATGGCTACCATGCTTAATGGAGCAGCAATTATGGATGGAGCACTTCTTTTAATAGCTGCAAATGAAAGCTGTCCCCAACCTCAAACTTCAGAGCACCTGGCTGCTGTTGAAATCATGCGCCTCCAACATATTATAATCCTTCAAAACAAAGTCGATCTCATTCAAGAAAATGTAGCCATCAATCAGCATGAAGCAATTAAAAAATTTATTAAAGGGACTGTAGCTGATAATGCTCCTATTGTTCCAATTTCTGCCCAGCTAAAGTATAATATCGATGTTGTTTGTGAATATATAGTGAAGAACATTCCCATTCCGGAGCGAAACTTTGTGTCCCCTCCAAACATGATTGTAATTCGATCATTTGATGTCAACAAGCCTGGATTCGAAGTTGATGAAATCAAAGGTGGTGTAGCCGGTGGAAGTATCCTTAGGGGTGTTTTGAAGGTGAACCAATATATTGAGGTTCGTCCTGGAATTGTTGTTAAGGATGAAAGTGGGAATATCAAATGCACACCAATATATTCAAGAATTGTTTCTTTGTATGCGGAGCAAAATGAGCTTCAATTTGCTGTGCCTGGTGGCCTCATCGGAGTTGGTACAACCATGGATCCCACTTTGACACGAGCTGATAGATTGGTTGGCCAGGTTCTTGGTGAAGTTGGATCGCTCCCTGAGGTTTTCGTTGAGCTTGAGGTTAATTTCTTCCTACTTCGACGACTTCTGGGTGTGAGAACGAAGGGCTCAGAAAGGCAAGGTAAGGTTTCAAAACTAGCCAAGGGGGAGATCCTAATGTTGAACATTGGATCTATGTCCACTGGGGCCCGCGTCCTTGCGGTGAAGAATGATCTGGCAAAGTTACAACTCACTTCTCCGGTTTGTACAAGCAAAGGGGAAAAAATAGCTTTGAGTCGACGAGTTGAGAAGCACTGGCGGCTTATTGGCTGGGGCCAGATTCAAGCAGGTACCACTCTTGAAGTTCCTCCCTCCCCCATTTAA | 1395 | 43.08 | MSRKGLMEQDLSKLDVTKLSPTSKEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDQCPRPLTYKAYGSGKEDSPLCDVPGFENCRMELLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIKKFIKGTVADNAPIVPISAQLKYNIDVVCEYIVKNIPIPERNFVSPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLKVNQYIEVRPGIVVKDESGNIKCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKGEILMLNIGSMSTGARVLAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGTTLEVPPSPI | 464 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 21578980 | 21582631 | + | Bpe018245.1 | Bpe05g00832 | 104609 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe05g00832 | 464 | CDD | eIF2_gamma_II | 241 | 354 | IPR044127 | GO:0000049 | |
Bpe05g00832 | 464 | Pfam | Initiation factor eIF2 gamma, C terminal | 362 | 451 | IPR015256 | - | |
Bpe05g00832 | 464 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER | 1 | 463 | - | - | |
Bpe05g00832 | 464 | Gene3D | Translation factors | 357 | 456 | - | - | |
Bpe05g00832 | 464 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 | 1 | 463 | - | - | |
Bpe05g00832 | 464 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 355 | 452 | IPR009001 | - | |
Bpe05g00832 | 464 | PRINTS | GTP-binding elongation factor signature | 34 | 47 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe05g00832 | 464 | PRINTS | GTP-binding elongation factor signature | 139 | 150 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe05g00832 | 464 | PRINTS | GTP-binding elongation factor signature | 123 | 133 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe05g00832 | 464 | PRINTS | GTP-binding elongation factor signature | 177 | 186 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe05g00832 | 464 | CDD | eIF2_gamma | 33 | 240 | IPR044128 | GO:0005525 | |
Bpe05g00832 | 464 | Pfam | Elongation factor Tu domain 2 | 268 | 350 | IPR004161 | GO:0005525 | |
Bpe05g00832 | 464 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 26 | 242 | IPR027417 | - | |
Bpe05g00832 | 464 | Gene3D | Translation factors | 242 | 356 | - | - | |
Bpe05g00832 | 464 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 30 | 239 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe05g00832 | 464 | Gene3D | - | 30 | 240 | IPR027417 | - | |
Bpe05g00832 | 464 | Pfam | Elongation factor Tu GTP binding domain | 32 | 236 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe05g00832 | 464 | SUPERFAMILY | Translation proteins | 240 | 354 | IPR009000 | - | |
Bpe05g00832 | 464 | CDD | eIF2_gamma_III | 357 | 451 | IPR015256 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g01137 | Bpe-Chr4:10075951 | Bpe05g00832 | Bpe-Chr5:21578980 | 0 | dispersed | |
Bpe05g00832 | Bpe-Chr5:21578980 | Bpe06g00480 | Bpe-Chr6:16069561 | 5.62E-16 | dispersed | |
Bpe05g00832 | Bpe-Chr5:21578980 | Bpe10g00430 | Bpe-Chr10:11726824 | 1.50E-17 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe05g00832 | K03242 | - | cpap:110819896 | 879.396 |