Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00855 ATGGCCGTCGAAGCAGGCGGGAAAATAATGGAAATGGGGTACGAATTGAGCTCCGATCACCCTTCCGTTGTTTCGATGAACCTATTCGTTGCTCTTCTTTGCGCCTGCATTGTTATCGGACATTTTCTTGAGGAAAATCGTTGGTTCAATGAGTCTATTACGGCTCTCATTATTGGTTTATTCGCTGGGGTGGTTATATTGCTTACGACCAGAGGAAAAAGCTCACGTTTGTTAGTGTTCAGTGAAGATCTCTTCTTCATCTATCTTCTTCCCCCCATAATATTCAATGCTGGGTTCCAGGTGAAGAAGAAGCAATTTTTCCGCAACTTTATGACCATCATGCTCTTTGGAGCATTTGGCACTACCATATCCTTTGGAATTATATCATCAGGTGCCTTCCATTTTTTTCAAAAAATAGGAATTAGTTCGCTTGAGATTACCGATTACTTAGCAGTTGGCGCCATATTTTCTGCAACCGATTCTGTTTGTACTCTGCAGGTTATTAATCAAGATGAGACTCCCTTTTTGTACAGTTTGGTTTTTGGGGAAGGGGTTGTTAATGATGCTACATCTGTGGTGCTATTCAACGCGATTCAGAAGTTTGATCTCACTCACATCAATTCAAGCATAGTTTTGCAATTCATTGCCAACTTCTTGTATTTATTTATTGCAAGCACATTGTTGGGTTTCTTGGCTGGTCTGATTAGTGCATACATAATTAAGAAGCTCTACTTTGGCAGACATTCTACGGATCGTGAGGTGGCACTGATGATTCTCATAGCATATCTCTCGTATGTCTTGGCTGAGCTCTTTAACCTAAGCGCGATTCTTACCGTATTCTTTTGCGGTATTGTTATGTCACATTACACCTGGCATAATGTGACTGAAAGTTCAAGGGTGACCAGTAAGCATGCGTTTGCTACTCTATCGTTGGTAGCCGAGATTTTTATCTTCCTTTACGTTGGCATGGATGCCTTGGACATTGAAAAGTGGAGATACGTAAGCCATAGTCCTAGGAAATCCATTGGAGTGAGTTCTATATTGTTGGGGCTTGTTCTGGTTGGAAGGGCAACTTTTGTTTTTCCTCTTTCCTTCTTGTCCAATTTGACCAAGAAGTCGTCATACGAGAAGATTAATTTAAAGCAACAATTCACGATTTGGTGGGCCGGTCTTATGCGCGGTGCAGTTTCTATGGCACTTTCATATAATCAGTTTAGCAGGTCAGGTCACACCCAATTACGTGGGAATGCATTCATGATCACTAGCACTATAACAGTTGTTCTTTTCAGCACCATGGTGTTTGGATTGATGACGAAAGCTTTAGTTAGAATTTTGCTGCCTCCTTCAAAACAAACAAGCAGTGTGCTTTCTGAACCATCTACTCCTAAATCCTTCACTCTCCCACTTCTTTGCAATGGGAACAGCTCGGGAAGTGGTGATAATTGCAGCCAAACTTGGAGCTTGTGGATGATTTTTAGCATTCCTACTCGATCTGTACACCATTATTGGCGGAGTTTTGACGATGCTTTTATGCGTCCGGTTTTCGGAGGGAGAGGTTTCGTGCCCTTTATTGCTGGCTCGGCATCTGATGAAGGCGGCCTACAATGGCTGTGCGAGGAAGTACAGATTGAAGGTAACAAAATCACTAATAGCTAG 1656 42.21 MAVEAGGKIMEMGYELSSDHPSVVSMNLFVALLCACIVIGHFLEENRWFNESITALIIGLFAGVVILLTTRGKSSRLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAFGTTISFGIISSGAFHFFQKIGISSLEITDYLAVGAIFSATDSVCTLQVINQDETPFLYSLVFGEGVVNDATSVVLFNAIQKFDLTHINSSIVLQFIANFLYLFIASTLLGFLAGLISAYIIKKLYFGRHSTDREVALMILIAYLSYVLAELFNLSAILTVFFCGIVMSHYTWHNVTESSRVTSKHAFATLSLVAEIFIFLYVGMDALDIEKWRYVSHSPRKSIGVSSILLGLVLVGRATFVFPLSFLSNLTKKSSYEKINLKQQFTIWWAGLMRGAVSMALSYNQFSRSGHTQLRGNAFMITSTITVVLFSTMVFGLMTKALVRILLPPSKQTSSVLSEPSTPKSFTLPLLCNGNSSGSGDNCSQTWSLWMIFSIPTRSVHHYWRSFDDAFMRPVFGGRGFVPFIAGSASDEGGLQWLCEEVQIEGNKITNS 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21739042 21742699 - Bpe018268.1 Bpe05g00855 104632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00855 551 PANTHER SODIUM/HYDROGEN EXCHANGER 3 10 532 - -
Bpe05g00855 551 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe05g00855 551 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe05g00855 551 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe05g00855 551 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe05g00855 551 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bpe05g00855 551 Gene3D - 145 197 - -
Bpe05g00855 551 PANTHER SODIUM/HYDROGEN EXCHANGER 10 532 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01889 Bpe-Chr2:20861052 Bpe05g00855 Bpe-Chr5:21739042 0 dispersed
Bpe05g00855 Bpe-Chr5:21739042 Bpe06g00499 Bpe-Chr6:16214655 0 dispersed
Bpe05g00855 Bpe-Chr5:21739042 Bpe05g00261 Bpe-Chr5:15529673 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00855 - - cmos:111436756 816.994