Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00857 ATGGATTCAGTGAGGTGCTGGTTCAATAAGTTTAAGTCCAAAGACAAGTCGAAGTCTCCAAAGAAGAAAGAGGAAACAAGTGGGAAGGAGCCAGTAAAAGCTCCAACTACTGAGGAAATACCTTCAAATGTAACCAAACAGAAGGTTGCAGCTGCAAAGCAGTATATTGAAAACCATTATAAGAAGCAAATGAAGAACTTGCAGGAAAGGAAGGATAGGCGTGATTTATTAGAAAAAAAATTGGCTGATGCTGAGGTTTCTGAAGACGAGCTAAACAACCTGCTTAAATACTTAGAGAAGAAGGAGACAGAATATATGCGCATTCAGAGGCATAAAATGGGTGCTGATGATTTTGAGCCTTTGACTATGATAGGGAAGGGTGCGTTTGGAGAGGTTAGAGTCTGTAGAGAGAAAGCAACAAGTCATGTATATGCTATGAAGAAGCTTAAAAAATCAGAGATGCTTCGAAGAGGCCAGAGGATAGCTTTATCTGGTCTCATTCACTTCACTTACCCATTTTTATTTCATAATATCAAGGTTGAACATGTGAAAGCAGAGAGGAATCTACTTGCAGAGGTTGATAGCAATTGTATTGTGAAGCTGTACTGTTCCTTCCAAGATGAGGAATATTTATATCTAGTTATGGAATACCTACCTGGGGGAGATATGATGACTTTACTTATGCGGAAGGATATACTTACAGAAGATGAGGCCAAGTTTTATGTTGGGGAAACTGTTCTGGCTATTGAATCCATTCATAAACATAATTATATTCACAGCATCTTGTTGGTAGTAATCCTCGTTTTGTTGGCATTCTTCAGAGATATCAAACCTGACAACTTACTACTAGATAGAACTGGTCATATGAAACTATCAGATTTTGGATTATGTAAACCATTGGACTGTACTAACCTCCAAGAAAAGGATTTTTCTATTGGGAACAACCTTAGTGGAGCCCTTCAAAGTGATGGGCGCCCTGCAATACCAAAACGGACACAGCAAGAACAACTGCAGCACTGGCAACGAAACAGAAGGATGCTAGCCTATTCGACTGTTGGAACTCCTGACTACATTGCCCCAGAAGTTTTGCTGAAGAAAGGATATGGCATGGAGTGTGATTGGTGGTCTCTTGGAGCTATAATGTATGAAATGCTTGTTGGATACCCGCCTTTTTATTCAGATGAACCCATGTCCACTTGTAGGAAGATAGTCAATTGGAGGACTCACTTAAAATTTCCAGAAGAAGCAAAACTCTCTCTGGAAGCTAAGGATCTAATAAGTAAACTCTTGTGCAATGTTGACCAGAGACTGGGAACAAAAGGGGCTGATGAAATAAAGGCTCACCCGTGGTTCAAGGGCATTGAATGGGATAAATTATATCAAATGAAAGCTGCATTTATTCCAGAAGTCAATGATGAACTGGATACTCAAAATTTTGAGAAATTTGAAGAGGTTGAAAACCAAATCCAGACATCATCAAAATCGGGTCCATGGAGAAAGATGCTCTCATCTAAGGATATTAACTTCGTGGGTTACACTTACAAGAACTTTGAGATTGTCAACGACCATCAGATACCTGGCCTCGCTGAACTCAAGAAGAAGAGCACAAAACCAAAGAGACCTTCTATCAAAAATCTCTTTGGTAATTTCCTTATTAAGATACTGATCATCATGTATATTATGTTGTGTTTGTTGTTCAATGTGGATTGTGTTTTTGCCAATGCAGATGATGAATCAGCCATGGGTGCGAATCACTCGGTCCAGGGAAGTTTTCTGAAGCTCTTGCCTCCCCAGTTCGAGGTCCCCGAGAAGCAAATGGATGGGGAGGAGAAGCATTAA 1839 39.97 MDSVRCWFNKFKSKDKSKSPKKKEETSGKEPVKAPTTEEIPSNVTKQKVAAAKQYIENHYKKQMKNLQERKDRRDLLEKKLADAEVSEDELNNLLKYLEKKETEYMRIQRHKMGADDFEPLTMIGKGAFGEVRVCREKATSHVYAMKKLKKSEMLRRGQRIALSGLIHFTYPFLFHNIKVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLVMEYLPGGDMMTLLMRKDILTEDEAKFYVGETVLAIESIHKHNYIHSILLVVILVLLAFFRDIKPDNLLLDRTGHMKLSDFGLCKPLDCTNLQEKDFSIGNNLSGALQSDGRPAIPKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSLEAKDLISKLLCNVDQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVENQIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIVNDHQIPGLAELKKKSTKPKRPSIKNLFGNFLIKILIIMYIMLCLLFNVDCVFANADDESAMGANHSVQGSFLKLLPPQFEVPEKQMDGEEKH 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21780310 21785438 - Bpe018270.3 Bpe05g00857 104634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00857 612 CDD STKc_NDR_like 116 515 - -
Bpe05g00857 612 ProSiteProfiles Protein kinase domain profile. 118 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00857 612 SMART pkinase_C_6 452 516 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe05g00857 612 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 553 - -
Bpe05g00857 612 MobiDBLite consensus disorder prediction 12 47 - -
Bpe05g00857 612 MobiDBLite consensus disorder prediction 12 32 - -
Bpe05g00857 612 Coils Coil 60 104 - -
Bpe05g00857 612 Gene3D Phosphorylase Kinase; domain 1 470 480 - -
Bpe05g00857 612 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Bpe05g00857 612 Pfam Protein kinase domain 120 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00857 612 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 37 553 - -
Bpe05g00857 612 SUPERFAMILY Protein kinase-like (PK-like) 94 504 IPR011009 -
Bpe05g00857 612 Gene3D Transferase(Phosphotransferase) domain 1 350 469 - -
Bpe05g00857 612 SMART serkin_6 118 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00857 612 Gene3D Phosphorylase Kinase; domain 1 179 221 - -
Bpe05g00857 612 Gene3D Phosphorylase Kinase; domain 1 91 159 - -
Bpe05g00857 612 Gene3D Transferase(Phosphotransferase) domain 1 222 313 - -
Bpe05g00857 612 Pfam Protein kinase C terminal domain 470 514 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bpe05g00857 612 ProSiteProfiles AGC-kinase C-terminal domain profile. 452 524 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00474 Bpe-Chr1:2926563 Bpe05g00857 Bpe-Chr5:21780310 0 dispersed
Bpe05g00857 Bpe-Chr5:21780310 Bpe06g00550 Bpe-Chr6:16532541 0 dispersed
Bpe05g00857 Bpe-Chr5:21780310 Bpe10g00480 Bpe-Chr10:12055396 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63363 PF00069 Pkinase 2.30E-54 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00857 K08790 - qsu:112030601 952.97