Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00865 CTGGCTAATCCGTGGTGGGCCGGCCAAGTAGGGCTGCCGATAATCGACTCGGCAGCCAATTCATCGCTTCTGAAACTTCAACGCGACCGTGAAACCTCCATGAACGATCAAAACAGTAGAGAAGACGATGATGACGAGAGAGAAAACGGATCAGACGAGCCAAGAGAAGGAGCCGTCGAGATCGGGAATCGCAGGCCGAGAGGCCGTCCACCGGGATCCAAAAACAAGCCGAAACCACCGATTTTCGTGACCCGAGACAGCCCAAACGCCCTCCGGAGCCACGTTATGGAGGTCGCCGGAGGAGCTGATGTGGCGGAGAGCGTAGCTCAGTTCGCTAGGCGTAGGCAGCGGGGTGTGTGCGTGCTGAGCGCTAGCGGCGCAGTCACAAACGTCACCATACGCCAGCCTGCAACACCTGGTGCTGTGGTGGCACTACATGGACGGTTCGAGATTTTGTCACTGACCGGAGCTTTTCTGCCAGGTCCGGCTCCACCCGGGTCAACGGGTATGACCGTTTATCTCGCCGGAGGGCAAGGACAGGTCGTCGGAGGGAGTGTAGTTGGGTCTCTAGTTGCAGCTGGGCCAGTAATGGTGATTGCCGCAACTTTTTCCAATGCGACTTACGAGAGATTGCCTCTTGAAGACGACGACGGTAATGAAGGTGGAATCGGTAGTACAGGAGCTGGAACCTCCCCTCCGTCGATGGGAGGCAGCGGAGGGAATTTCCCGGCTGGTTTGCCGGATTCTTCTTCTGCACTTCCCGTCTACAATTTGACTCCAAATCTTATTTCCAATGGAGGTCATCTCGGACATGAAGCTGCTTATGCTACTTGGGGCGGCCATGGGAGGCCAAACTATTGA 861 56.33 LANPWWAGQVGLPIIDSAANSSLLKLQRDRETSMNDQNSREDDDDERENGSDEPREGAVEIGNRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSASGAVTNVTIRQPATPGAVVALHGRFEILSLTGAFLPGPAPPGSTGMTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFSNATYERLPLEDDDGNEGGIGSTGAGTSPPSMGGSGGNFPAGLPDSSSALPVYNLTPNLISNGGHLGHEAAYATWGGHGRPNY 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21849956 21850816 + Bpe018278.1 Bpe05g00865 104642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00865 286 MobiDBLite consensus disorder prediction 26 89 - -
Bpe05g00865 286 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 217 - -
Bpe05g00865 286 Gene3D - 91 220 - -
Bpe05g00865 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 285 IPR014476 GO:0003680
Bpe05g00865 286 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 205 IPR005175 -
Bpe05g00865 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 7 285 - -
Bpe05g00865 286 MobiDBLite consensus disorder prediction 211 246 - -
Bpe05g00865 286 PIRSF ESCAROLA 11 286 IPR014476 GO:0003680
Bpe05g00865 286 CDD DUF296 92 175 IPR005175 -
Bpe05g00865 286 ProSiteProfiles PPC domain profile profile. 88 224 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01716 Bpe-Chr4:23004462 Bpe05g00865 Bpe-Chr5:21849956 6.76E-72 dispersed
Bpe04g01828 Bpe-Chr4:23606257 Bpe05g00865 Bpe-Chr5:21849956 8.39E-72 dispersed
Bpe05g00865 Bpe-Chr5:21849956 Bpe11g00699 Bpe-Chr11:5379086 1.31E-78 dispersed
Bpe12g00160 Bpe-Chr12:1200266 Bpe05g00865 Bpe-Chr5:21849956 7.45E-69 dispersed
Bpe14g00904 Bpe-Chr14:6741793 Bpe05g00865 Bpe-Chr5:21849956 6.21E-71 dispersed
Bpe13g00567 Bpe-Chr13:12842623 Bpe05g00865 Bpe-Chr5:21849956 9.07E-75 wgd
Bpe14g01239 Bpe-Chr14:9332880 Bpe05g00865 Bpe-Chr5:21849956 5.14E-69 wgd
Bpe04g00800 Bpe-Chr4:5254590 Bpe05g00865 Bpe-Chr5:21849956 4.53E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00865 - - mesc:110601522 354.755