Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00868 ATGGTTCGGGACGGTCATGTGGTGCCGGCCGACCCACAGGCTTTGGTGGTGGCGAAGAAGAAGGGTCAATCGTCTCGGAGTTGGATGCTTTTGGATTCGACCGGCCAAGGTACCGTCCTCGATGTCGACAAGTATGCTGTGATGCACCGGGTTCAGATTCATGCACGAGACCTTCGGATTCTAGATCCTTTGCTCTCGTATCCGTCCACCATTCTTGGCCGCGAGGGAGCCATTGTTCTTAATTTGGAGGTGAATATAGGGGGTGATATTTGCAGTATATATATACTTGTTTTGCTCCGAGATCCAATGGATGAGAATGTTATCCCGGTTGTTGAAGAGCTACAAAGGCGATTGCCTCCCACTAATGCCATCCAGCTTCAAAAGCAAGAAGGTGGGAAAGAGTATTCTGGCGGGCATAATGATGTTGAAGCCGATTCTCCATTTGAATTTCGAGCCCTAGAGGTAGCTTTAGAAGCCATTTGTAGTTTTCTTGCTGCACGAACAACAGAACTGGAGACTACAGCCTATCCTGCCTTAGATGAGCTCACCTCCAAAATTAGTAGCCGTAACTTGGACAGAGTTCGTAAACTGAAAAGTGCAATGACCAGGTTGACAGGAAGAGTTCAAAAGGTGAGGGATGAGCTTGAGCAGCTATTGGATGACGACGACGATATGACAGACCTTTACTTGACAAGAAAGTTAGCTGGGGCATCTTCTCCTGTTAGTGCCTCTGGCGTTCCTAATTGGTATCCTGCCTCTCCTACGATAGGTTCAAAAATATCAAGAGCAAGCAGAGCTAGCATCGCAACTGTTCGTGGAGACGATAATGATGTCGAAGAGCTTGAAATGTTGCTGGAGGCTTACTTCATGCAAATTGATGGCACATTGAACAAATTAACAACGTTGCGCGAGTACATAGATGACACAGAAGATTACATTAATATTCAGCTTGACAATCATCGAAATCAGCTTATTCAGCTGGAGCTTTTTCTCAGTTCAGGGACTGTTTGTTTGTCAATTTATTCTTTGGTGGCTGCCATTTTTGGCATGAATATCCCGTACACTTGGAATGACGACTATGGTTACATGTTCAAATGGGTGGTCATCCTGACAGGTGTTGCGTGTGCAATTCTATTCGTGATTGTTATTGCATATGCTCGCCACAAAGGTTTGGTGGGATAG 1182 45.69 MVRDGHVVPADPQALVVAKKKGQSSRSWMLLDSTGQGTVLDVDKYAVMHRVQIHARDLRILDPLLSYPSTILGREGAIVLNLEVNIGGDICSIYILVLLRDPMDENVIPVVEELQRRLPPTNAIQLQKQEGGKEYSGGHNDVEADSPFEFRALEVALEAICSFLAARTTELETTAYPALDELTSKISSRNLDRVRKLKSAMTRLTGRVQKVRDELEQLLDDDDDMTDLYLTRKLAGASSPVSASGVPNWYPASPTIGSKISRASRASIATVRGDDNDVEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVAAIFGMNIPYTWNDDYGYMFKWVVILTGVACAILFVIVIAYARHKGLVG 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21869211 21878278 - Bpe018280.2 Bpe05g00868 104645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00868 393 CDD Mrs2_Mfm1p-like 28 391 IPR039204 -
Bpe05g00868 393 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 393 - -
Bpe05g00868 393 Gene3D Magnesium transport protein CorA, transmembrane region 107 324 - -
Bpe05g00868 393 Gene3D - 14 85 - -
Bpe05g00868 393 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 330 382 IPR045863 -
Bpe05g00868 393 Coils Coil 194 221 - -
Bpe05g00868 393 Pfam CorA-like Mg2+ transporter protein 248 382 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bpe05g00868 393 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 393 IPR039204 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00868 Bpe-Chr5:21869211 Bpe07g00026 Bpe-Chr7:180008 3.18E-99 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00868 K16075 - pop:7467525 585.489