Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00883 ATGAATGCCAGTCCAGCGACGCTCCGGTCGATTCTGGACAAACCGCTTAACCAGCTCACTGAGGATGACATTTCGCAACTCACCCGCGAAGACTGCCGGAAATATCTCAAAGAAAAAGGAATGCGGAGGCCTTCGTGGAACAAATCGCAGGCGATCCAGCAGGTTATTTGCCTAAAAGCTTTGCTTGAGCCTTGCGATGATTCCGGAGCCGTTGCGCTCAGAAAGCTTGCTGTTTCTACTCGTGTGACTTTGAGTCCTGGAGATTCTGCTAAAGAACCAAGCGATGATACGCAGCCTCCATTGTCAACTGATGAAGCTTTTCCAACAAGGCAAGCTGAGCCTTCGGATTCTATTCAAGAGGATTCACATGCTGATTCAGAGTACAAGGTCACCAGTCTGAGAAGCAAATGCACAATAAATGGTTCGGTTGGGCAAATGGCAATTTTTTACAGTGGCAAGGTGAACGTGTACGATGAAATACCTCGTGATAAAGCACGGGCAATCATGCATGTTGCAGCTCATCCAATTCATTTTAGAGGAGATCATTTATTTGGTGGATTTCCTTTTCGATCTCACTCTCCATGCCATTTGCAGATGACAAATGAAAAAGACGGCCCTTTTCCTCTTAAACCCACTCTCCACCATGCAACACAAACAGGTATTGTTTGA 669 46.19 MNASPATLRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVICLKALLEPCDDSGAVALRKLAVSTRVTLSPGDSAKEPSDDTQPPLSTDEAFPTRQAEPSDSIQEDSHADSEYKVTSLRSKCTINGSVGQMAIFYSGKVNVYDEIPRDKARAIMHVAAHPIHFRGDHLFGGFPFRSHSPCHLQMTNEKDGPFPLKPTLHHATQTGIV 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21967161 21968890 - Bpe018294.1 Bpe05g00883 104660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00883 222 ProSiteProfiles Tify domain profile. 139 174 IPR010399 -
Bpe05g00883 222 MobiDBLite consensus disorder prediction 82 115 - -
Bpe05g00883 222 MobiDBLite consensus disorder prediction 82 125 - -
Bpe05g00883 222 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 6 207 - -
Bpe05g00883 222 SMART tify_2 139 174 IPR010399 -
Bpe05g00883 222 Pfam tify domain 145 173 IPR010399 -
Bpe05g00883 222 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 6 207 IPR040390 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00883 Bpe13g00588 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00588 Bpe-Chr13:13003423 Bpe05g00883 Bpe-Chr5:21967161 8.76E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21486 PF06200 tify 1.90E-12 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00883 - - csv:101204377 248.825