Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00890 ATGGGGAAGACAAGCTCATGGCTAAGAAGTTTCTTAACAGCAAAGAAAGATAAGAAGGAAACATACCCGAATAATCAAAATTCTTCGATTTTGATTCCTCAGCCTACTTCGAAAGAGAGAAGAAGATGGAGTTTCAGAAGATCTTCAGCCAGTTCTAAGGATAAAAATTCGAATCCAAATCAGTCGAATGCCGGCCAATTCTCAGCGAGTCAAATCGACAAGGCGAAGAACACACCGACCATCGAGGATACTGCAGCGACGAGAATTCAGTCGGCTTTTCGATCTTATTTGGTAGTTTTTTCACTGGTTTTATGTTCATTGATTTGTGATTGCAAAGAGTTGAAATCTTGTGAGATTTTGGTTGATTGTTTTCAGGCAAGAAAGGCTCTTTTTGCACTAAGAGGATTAGTGAAGCTGCAAGCATTGGTTAGAGGTCATTTGGTGAGAAAAAGGGCCACTGCCACCCTCCGTTGCATGCAGGCACTGATGATGGCGCAGGCTCGAGCTCGTGCGCAAAGGCTTCGAATGGCGCACGAATCGAAGTCTAGTACGTCAAGGCATTTCTTCCAAGGAAAATATTATCGTTATGAGAATGAAAGAGGAACGGAAGAAAACATCAAAATTGTGGAGGTTGATCTTGGTCATGGAGCAAATCAACACAGAACACAAGGCCATTTTGAAGGCTATTACTCATCAACCACATCACAAAGCAGCCCAAAGTTCAACTCATCTGCGCCCTCCAGACATGATCAATCCAAACCATCTCCTAATTTTGCTGTTGAATATCAGGCATCCCATGATAACCCATTTTACCCAAATTACATGGCTAATACCGAGTCGTCGAGGGCCAAAGCTAGGTCCCAAAGTGCACCTAAGACTAGACCACCTGACTGGTTAGAGAGCCAATCGAGCAGGAGAAGGGTTTTGCTGGAAGGCCGGCACTGTCCGAGGCCCATTAGGTGCATGCAGAGGTCGTCTTCACAAGCCGGGTATGGAGCTCAGAACTATGAAAATCCATGGGCAATTAAACTTGACAAATCCTCAGTGTCTCTCAAGGATAGTGAATATGGAACTACTAGTACGGTTGTCAGTAGTACCAATTATTGCAGATCTCTTGCTGCTTATGATGTGAGTATTAATTACTCTAATTAA 1152 43.58 MGKTSSWLRSFLTAKKDKKETYPNNQNSSILIPQPTSKERRRWSFRRSSASSKDKNSNPNQSNAGQFSASQIDKAKNTPTIEDTAATRIQSAFRSYLVVFSLVLCSLICDCKELKSCEILVDCFQARKALFALRGLVKLQALVRGHLVRKRATATLRCMQALMMAQARARAQRLRMAHESKSSTSRHFFQGKYYRYENERGTEENIKIVEVDLGHGANQHRTQGHFEGYYSSTTSQSSPKFNSSAPSRHDQSKPSPNFAVEYQASHDNPFYPNYMANTESSRAKARSQSAPKTRPPDWLESQSSRRRVLLEGRHCPRPIRCMQRSSSQAGYGAQNYENPWAIKLDKSSVSLKDSEYGTTSTVVSSTNYCRSLAAYDVSINYSN 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21999414 22000952 + Bpe018301.2 Bpe05g00890 104667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00890 383 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Bpe05g00890 383 MobiDBLite consensus disorder prediction 224 256 - -
Bpe05g00890 383 MobiDBLite consensus disorder prediction 270 298 - -
Bpe05g00890 383 MobiDBLite consensus disorder prediction 50 70 - -
Bpe05g00890 383 Pfam Protein of unknown function (DUF4005) 238 307 IPR025064 -
Bpe05g00890 383 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 124 248 - -
Bpe05g00890 383 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 98 - -
Bpe05g00890 383 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 245 359 - -
Bpe05g00890 383 MobiDBLite consensus disorder prediction 18 70 - -
Bpe05g00890 383 PANTHER IQ-DOMAIN 5-RELATED 124 248 - -
Bpe05g00890 383 Pfam IQ calmodulin-binding motif 137 151 IPR000048 GO:0005515
Bpe05g00890 383 Pfam IQ calmodulin-binding motif 85 98 IPR000048 GO:0005515
Bpe05g00890 383 MobiDBLite consensus disorder prediction 220 256 - -
Bpe05g00890 383 PANTHER IQ-DOMAIN 5-RELATED 1 98 - -
Bpe05g00890 383 PANTHER IQ-DOMAIN 5-RELATED 245 359 - -
Bpe05g00890 383 MobiDBLite consensus disorder prediction 269 303 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00817 Bpe05g00890 CCT
Bpe05g00890 Bpe14g01207 CCT
Bpe04g00817 Bpe05g00890 ECH
Bpe05g00890 Bpe14g01207 ECH
Bpe05g00890 Bpe13g00591 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00890 Bpe-Chr5:21999414 Bpe09g00630 Bpe-Chr9:14961039 2.32E-26 dispersed
Bpe13g00591 Bpe-Chr13:13019910 Bpe05g00890 Bpe-Chr5:21999414 1.81E-60 wgd
Bpe14g01207 Bpe-Chr14:9009013 Bpe05g00890 Bpe-Chr5:21999414 2.58E-22 wgd
Bpe04g00817 Bpe-Chr4:5392011 Bpe05g00890 Bpe-Chr5:21999414 6.05E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00890 - - qlo:115950927 293.123