Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00909 ATGAGTATGGCGATTCTTGAGACCATTGTCGTTGTCCTTCTCCTTATGCTGCTTTTGATTATCATCGTCATCATCCTCTTAGCCTGCAAGCCATGGCGATTCCTTTCCACTTCTCGGTCCCGTACGATCAAGGTCCCTGAACTTGAGAGGCCCCTTGTTTCAGACAATGTGGATCCTCGAGATCAAAGCAATGAATTTCCAAGAGATTACGATTTAGAGGGAGCTTTTCAATCTGATGGGCATTTTCGCTCCCCTCGAGCACATGGACTCATTTACAAACAAAGGCTTCCAGCTACATCTCCAGATCTACTTGCAGATTCTTCAGAAGAAATTTCTGTTGGCGAGACACTTAAGAGGCCATACGATGCAAACCAGATTTCAGAAGTTCAAAGGCCTAGTAGACAGCGTCTTGGAAATGAAAGACATCAAGAGTCTCCCGGAAAAGATATCTTACATCAAAGAAGCTGCATCTCTTTGGAGGTTATTTCTGGTCCTTCTCGTGGATTTAGAACTATTATACATTCAACAAGCACCTCCCGGCTTCCTCTGACTCTTGGGAGGGTTTCTCCTAGTGATATTGTACTGAAGGATTCAGAGGTTTCAGGGAAGCATGCATTGATAAATTGGGATTTAAAAAAAATGAAATGGGAGCTGTTAGACATGGGTAGCTTGAATGGAACACTGCTGAATTCCCAACCTATACACCATCCTGATTCTGGAAGTAGAAATTGGAGTGATCCCACTGAACTTGCAAGTGGAGATATAATAACACTTGGTACAACCTCAAACGTACATGTTCATATAACTTCTCAAACTGAGGATCAAATTCCCTTTGGATTTGGTGTGGCATCTGATCCCATGGCTTTGCGGCAGGGAGGAAAGAAGTTGGTCATGGAAGATATGTTTTATTATAAGTGGCCTCTTCCTGGAATCAGTCAGTTTTTTGCATCTTCCTTATACAAACAATATTTTGTTTTGCAGTTGGGATTGTTTGGGATTTGTGATGGTCATGGTGGTTCAGCAGCTGCCAAAGATGCAAGCGAAATTCTACCAGAGATGGTTGCCACTATTTTATCCGATTCTTTGAAAATAGATCGGCTACTTTCCCTATGCAATGCTTCAGATGTTTTAAGGGATGCATTTTCTCGGACAGAATCGTGCATGAATCACCACTATGAGGGCTGCACTGCAACCTTACTTCTTGTATGGGTTGATTGTAATGATAATTACTTTTTGCAATGTGCAAATGTTGGCGATTCTTCTTGTATTTTGAATGTTGATGGGCAACCGATAAAGATGACTGAAGACCATAGAGTAACGAGCTATTCAGAACGACAACGAATAGAAAAATTAGGAGAGCCACTGAAAGATGGGGAAACACGTTTATGTGGTTTGAACCTTGCACGTATGCTTGGAGACAAATTTCTGAAACAACAGGATATTCGCTTCAGTTCAGAGCCTTATATAAGTCAAGTTGTACATATTAATCAAGCGAGCAGGGCATTTGCACTCATGGCAAGTGATGGCTTTTGGGATGTCATTAGTGTCAAGAAGGCAATTCAGCTAGTTCTTCAGGCTCAGGAGAGATACTCTAAAGATTCAGAAAATTTAGCGGAGAAGATTGCTAATTTTTTGTTGGGTGAGGCTAGAACACTGCGAACAAAGGATAATACCACTATAATTTACTTAGATTTTGACTCACATAAAATCTCTTGTAAAGTTGAATCATAA 1731 41.02 MSMAILETIVVVLLLMLLLIIIVIILLACKPWRFLSTSRSRTIKVPELERPLVSDNVDPRDQSNEFPRDYDLEGAFQSDGHFRSPRAHGLIYKQRLPATSPDLLADSSEEISVGETLKRPYDANQISEVQRPSRQRLGNERHQESPGKDILHQRSCISLEVISGPSRGFRTIIHSTSTSRLPLTLGRVSPSDIVLKDSEVSGKHALINWDLKKMKWELLDMGSLNGTLLNSQPIHHPDSGSRNWSDPTELASGDIITLGTTSNVHVHITSQTEDQIPFGFGVASDPMALRQGGKKLVMEDMFYYKWPLPGISQFFASSLYKQYFVLQLGLFGICDGHGGSAAAKDASEILPEMVATILSDSLKIDRLLSLCNASDVLRDAFSRTESCMNHHYEGCTATLLLVWVDCNDNYFLQCANVGDSSCILNVDGQPIKMTEDHRVTSYSERQRIEKLGEPLKDGETRLCGLNLARMLGDKFLKQQDIRFSSEPYISQVVHINQASRAFALMASDGFWDVISVKKAIQLVLQAQERYSKDSENLAEKIANFLLGEARTLRTKDNTTIIYLDFDSHKISCKVES 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 22108113 22114408 - Bpe018320.1 Bpe05g00909 104686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00909 576 Gene3D - 151 287 - -
Bpe05g00909 576 SMART FHA_2 182 234 IPR000253 GO:0005515
Bpe05g00909 576 SUPERFAMILY PP2C-like 291 567 IPR036457 -
Bpe05g00909 576 SMART PP2C_4 273 563 IPR001932 -
Bpe05g00909 576 Gene3D - 288 573 IPR036457 -
Bpe05g00909 576 PANTHER PROTEIN PHOSPHATASE 2C 36 575 IPR015655 GO:0004722|GO:0006470
Bpe05g00909 576 CDD PP2Cc 278 565 IPR001932 -
Bpe05g00909 576 MobiDBLite consensus disorder prediction 122 148 - -
Bpe05g00909 576 ProSiteProfiles Forkhead-associated (FHA) domain profile. 183 234 IPR000253 GO:0005515
Bpe05g00909 576 ProSiteProfiles PPM-type phosphatase domain profile. 279 565 IPR001932 -
Bpe05g00909 576 SUPERFAMILY SMAD/FHA domain 155 264 IPR008984 GO:0005515
Bpe05g00909 576 ProSitePatterns PPM-type phosphatase domain signature. 330 338 IPR000222 GO:0043169
Bpe05g00909 576 MobiDBLite consensus disorder prediction 134 148 - -
Bpe05g00909 576 Pfam Protein phosphatase 2C 329 557 IPR001932 -
Bpe05g00909 576 PANTHER PROTEIN PHOSPHATASE 2C 70 36 575 - -
Bpe05g00909 576 CDD FHA 159 262 IPR000253 GO:0005515
Bpe05g00909 576 Pfam FHA domain 184 259 IPR000253 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00842 Bpe05g00909 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00909 Bpe-Chr5:22108113 Bpe02g00524 Bpe-Chr2:3410677 1.10E-19 dispersed
Bpe04g00842 Bpe-Chr4:5542024 Bpe05g00909 Bpe-Chr5:22108113 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00909 K01090 - jre:109005870 783.867