Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe05g00910 | ATGAGCAGAAGCAGCAACAATGGCGGTGGTGGGCCGTGTGGAGCCTGCAAGTTTCTGAGAAGAAAATGCGTGAAAGGCTGCGTATTTGCTCCGTATTTCGATTCAGAACAAGGCACTGCACATTTTGCAGCAGTTCATAAGGTGTTTGGAGCAAGCAACGCTTCAAAACTTCTGATTCACGTTCCTGTTCATCGACGTCTGGATGCAGTCGTCACTCTCTGTTATGAGGCTTTGGCTAGGGTTAGAGATCCTGTCTATGGCTGCGTTGCCCATATTTTTTCTCTACAACAGCAGGTGATGAATTTGCAAATGGAGTTAGCTCTTGTTGAAGCTCGGCTTTACATGATACAAAGACTTTCACCTAATCTTGCACTTGCACCAACAATCCCTCGCTCTTTGTTCCAAGACACCATGTTATCGCCTTCAAACAAGCTCGTGCCTCTCGACCCGTTTCAAACTACGTCGTTTTTCTTTCCCGACCAAGGAGTAATATCCTCAGTTGATCTCAACAAAATTTTAGACTAG | 525 | 45.52 | MSRSSNNGGGGPCGACKFLRRKCVKGCVFAPYFDSEQGTAHFAAVHKVFGASNASKLLIHVPVHRRLDAVVTLCYEALARVRDPVYGCVAHIFSLQQQVMNLQMELALVEARLYMIQRLSPNLALAPTIPRSLFQDTMLSPSNKLVPLDPFQTTSFFFPDQGVISSVDLNKILD | 174 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 22116210 | 22117523 | - | Bpe018321.1 | Bpe05g00910 | 104687 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe05g00910 | 174 | Pfam | Lateral organ boundaries (LOB) domain | 12 | 110 | IPR004883 | - | |
Bpe05g00910 | 174 | Coils | Coil | 92 | 112 | - | - | |
Bpe05g00910 | 174 | ProSiteProfiles | LOB domain profile. | 11 | 113 | IPR004883 | - | |
Bpe05g00910 | 174 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 19 | 5 | 131 | - | - | |
Bpe05g00910 | 174 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 5 | 131 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe05g00910 | Bpe-Chr5:22116210 | Bpe06g00431 | Bpe-Chr6:15701204 | 8.59E-52 | dispersed | |
Bpe05g00910 | Bpe-Chr5:22116210 | Bpe05g00911 | Bpe-Chr5:22121456 | 8.08E-62 | tandem | |
Bpe04g00843 | Bpe-Chr4:5563744 | Bpe05g00910 | Bpe-Chr5:22116210 | 2.37E-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21488 | PF03195 | LOB | 7.50E-37 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe05g00910 | - | K21994 | zju:107405081 | 225.328 |