Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00911 ATGAGCACGAACCCAGCTTCCAGTAGCGGCGGATCAGGCGGCAGCGGATCAGGCGGTGGAGGAGGACCCTGCGGAGCCTGCAAGTTCCTGCGTAGAAAATGCGTGCAGGGATGCATATTCGCTCCCTACTTCGATTCAGAGCAAGGTGCCGCCCATTTTGCGGCGGTTCACAAGGTGTTCGGAGCCAGCAATGTGTCGAAGCTCCTCCTACATATTCCAGTCCACAAGCGCCTCGACGCCGTCGTCACTATTTGCTACGAGGCTCAAGCTCGCTTAAGAGACCCTGTTTATGGCTGCGTCGCCCACATATTTGCCCTCCAACAGCAGTTAGTCAATCTTCAAGCGGAGCTCTCCTACTTACAAGCACAATTAGCAACCCTAGAGCTTCCGCTGCCACCTCCTCCGCCGCAACTCTCTATTGCCGACCTCCCATCTTCGTCCTCTACTGCAGCCTCCTGTGACTTATCGACTCTTTTTGATCAAGTGGTTCAACCATCGTGGACTGTCCAGCACCGGTTACCGCGTCCGTTTGGGTCCGGCAGCAGCTCGGCCCTTGTCGATGGTGGCAGTGGAGGCGGTGATCTTCAAGCTTTGGCAAGAGAACTTCTTAATAGACACGGCACTTCTACTCCATGTACCAATGCTTCGTCTTCCACATCCCTAACTCAATGA 672 54.91 MSTNPASSSGGSGGSGSGGGGGPCGACKFLRRKCVQGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQLVNLQAELSYLQAQLATLELPLPPPPPQLSIADLPSSSSTAASCDLSTLFDQVVQPSWTVQHRLPRPFGSGSSSALVDGGSGGGDLQALARELLNRHGTSTPCTNASSSTSLTQ 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 22121456 22122812 + Bpe018322.1 Bpe05g00911 104688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00911 223 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 208 - -
Bpe05g00911 223 Pfam Lateral organ boundaries (LOB) domain 23 121 IPR004883 -
Bpe05g00911 223 MobiDBLite consensus disorder prediction 1 20 - -
Bpe05g00911 223 MobiDBLite consensus disorder prediction 1 15 - -
Bpe05g00911 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 5 208 - -
Bpe05g00911 223 ProSiteProfiles LOB domain profile. 22 124 IPR004883 -
Bpe05g00911 223 Coils Coil 103 123 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00843 Bpe-Chr4:5563744 Bpe05g00911 Bpe-Chr5:22121456 1.48E-111 dispersed
Bpe04g01365 Bpe-Chr4:20273610 Bpe05g00911 Bpe-Chr5:22121456 2.04E-53 dispersed
Bpe05g00911 Bpe-Chr5:22121456 Bpe06g00431 Bpe-Chr6:15701204 1.93E-56 dispersed
Bpe05g00910 Bpe-Chr5:22116210 Bpe05g00911 Bpe-Chr5:22121456 8.08E-62 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21489 PF03195 LOB 2.20E-38 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00911 K21994 - pvy:116128124 282.722