Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00988 ATGTCTCAATCAGATCAATCTCCTCATTTCGACAGACCCAGATTGCCGATCAAGAAGGTTTTAGCTAAGCTTCAGGGGGAGGGAGATGGTGCTGTTGTTAGGAGAGGCATTGGAAGGAGTGATTTGAAGAACTTGGATCCTTTCCTCATGTTGGATGATTTCTCAGTGGGTCCCCCTGCTGGATTTCCAGATCATCCACACAGAGGGTTTGAAACTGTCACGTATATGTTGCAGGGAGGGATTACTCATCAAGACTTTGCAGGGCACAAGGGCACAATATGGACTGGAGATGTGCAGTGGATGACTGCGGGGAGAGGGATTATTCACTCTGAAATGCCTGCCAGTGAAGGTGCCCAAACCGGTTTGCAGCTTTGGATCAACTTATCGTCCGAAGACAAAATGATTGAACCGAGATACCAAGAGCTTCTCAGCAAAGACATCCCGAGAGCCGAGAACGACGGAGTTGAAGTTCGAGTTATCGCTGGAGAATCGATGGGAATCCGGTCTCCGGTCTACACCAGAACTCCGACGATGTACCTCGATTTCACTCTAAAACCGAGGGCTCAGATGCATCAAAAAATCCCAGAATCCTGGAATTCGTTCGTGTATATAATCGAAGGAGAGGGGGTCTTTGGAGCCCCAAATTCATCGACCGTAGCAGCTCATCACCTTCTTGTTCTGGGCATTGGAGACGGTCTGAGCGTGTGGAATCGATCTTCGAAGACTCTGAGATTCGTGTTGATTGCAGGGCAGCCATTGAACGAGACCGTGGTTCAGTATGGACCTTTTGTGATGAACACTCAGGCCGAGATTGATCAAGCCATTGAAGACTACCATTACTGCAAAAATGGGTTTGAATTGGCCAAGTATTGGAGATCTCAATGA 885 48.02 MSQSDQSPHFDRPRLPIKKVLAKLQGEGDGAVVRRGIGRSDLKNLDPFLMLDDFSVGPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIWTGDVQWMTAGRGIIHSEMPASEGAQTGLQLWINLSSEDKMIEPRYQELLSKDIPRAENDGVEVRVIAGESMGIRSPVYTRTPTMYLDFTLKPRAQMHQKIPESWNSFVYIIEGEGVFGAPNSSTVAAHHLLVLGIGDGLSVWNRSSKTLRFVLIAGQPLNETVVQYGPFVMNTQAEIDQAIEDYHYCKNGFELAKYWRSQ 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 22685407 22687077 - Bpe018399.1 Bpe05g00988 104765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00988 294 PANTHER PIRIN-RELATED 5 294 IPR012093 -
Bpe05g00988 294 CDD cupin_pirin_N 31 128 - -
Bpe05g00988 294 Pfam Pirin 34 126 IPR003829 -
Bpe05g00988 294 Gene3D Jelly Rolls 27 279 IPR014710 -
Bpe05g00988 294 PANTHER PIRIN-LIKE PROTEIN 5 294 - -
Bpe05g00988 294 SUPERFAMILY RmlC-like cupins 16 292 IPR011051 -
Bpe05g00988 294 PIRSF Pirin 12 292 IPR012093 -
Bpe05g00988 294 CDD cupin_pirin_C 176 252 - -
Bpe05g00988 294 Pfam Pirin C-terminal cupin domain 179 284 IPR008778 -
Bpe05g00988 294 Gene3D Jelly Rolls 148 253 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01106 Bpe-Chr8:13107665 Bpe05g00988 Bpe-Chr5:22685407 9.05E-129 transposed
Bpe04g00915 Bpe-Chr4:6111048 Bpe05g00988 Bpe-Chr5:22685407 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00988 K06911 - pop:7468491 525.783