Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g01003 ATGGAGGAAAGCCTGGAAAGCCCTAACCCTCCATCTCCGCCGCACCAACCGCCGATTTCAACTCCTCCTTACCTCTACACGCCGTCACTTTCTCCTCTGCCTTTCGACCCTAACCACGTCATCGACTGGGCAGCCCTTCTCTCGGACCATGACAGACAGATAACGGACGACCCATCAGCCTCCAGCCCCTCTTTAATGGAGGAAACTGAAGTTGAAAAGGGGAGAGAGAGTAGAAGAAAAGGTTTTACAGTGAGAAAACCAAGCCGTCCTAGGTTTGTGTTTCAGACAAGAAGTGCTGAAGATATTCTTGACGATGGATTTCGATGGAGAAAATATGGACAAAAGGCTGTCAAGAACAGCGTCTATCCAAGGAGCTACTATCGCTGCACCCACCACACGTGCGAGGTGAAGAAACAAGTTCAAAGGTTATCAAAAGACAAGAGCATAGTTGTGACAACGTACGAGGGTGTCCATAACCATCCATGTGAGAAGTTGATGGAGACTCTCACTCCTTTTTTGAACCAAATCCAATTCCTTGCCCCTTTTTGA 549 48.09 MEESLESPNPPSPPHQPPISTPPYLYTPSLSPLPFDPNHVIDWAALLSDHDRQITDDPSASSPSLMEETEVEKGRESRRKGFTVRKPSRPRFVFQTRSAEDILDDGFRWRKYGQKAVKNSVYPRSYYRCTHHTCEVKKQVQRLSKDKSIVVTTYEGVHNHPCEKLMETLTPFLNQIQFLAPF 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 22768599 22769702 + Bpe018414.1 Bpe05g01003 104780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g01003 182 MobiDBLite consensus disorder prediction 54 80 - -
Bpe05g01003 182 ProSiteProfiles WRKY domain profile. 98 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe05g01003 182 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 63 178 - -
Bpe05g01003 182 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 63 178 IPR044810 GO:0003700
Bpe05g01003 182 SUPERFAMILY WRKY DNA-binding domain 96 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe05g01003 182 SMART WRKY_cls 103 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe05g01003 182 MobiDBLite consensus disorder prediction 7 28 - -
Bpe05g01003 182 Pfam WRKY DNA -binding domain 104 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe05g01003 182 MobiDBLite consensus disorder prediction 1 28 - -
Bpe05g01003 182 Gene3D WRKY domain 88 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g01003 Bpe-Chr5:22768599 Bpe13g00817 Bpe-Chr13:14475450 1.09E-45 dispersed
Bpe05g01003 Bpe-Chr5:22768599 Bpe13g00706 Bpe-Chr13:13646723 1.28E-31 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21497 PF03106 WRKY 2.00E-25 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g01003 - - pvy:116141408 210.305