Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g01029 AGTGATTACACGATCCGAAACGGAGAAAAAGTCTATCTTGGAAGAGCGATCCCATCGTTGGGCGTAGTGTTAGAGAGCATACAAAGAGGATTCAAAAGCCGATCCGAGACTACGGCGAAAAAAGATCGGGTGCAAGGAGAAGAATCGGAAAATCAAAAGCGAATTTTCGACCCACAAGGACCTTTTCTTCAAAAATGGAATAAGATATTTGTAATCTCATGTCTAATTGCAGCTGCTTTGGACTCTTTGTTCCTTTACATCCCCGTGATGGATGGAGATCGAAAATGCCTCGCAATGGACAGGCCGCTTGAGATCACTGCATGTGTTCTCCGATCATTTATTGATCTCTTCTACATTCTTCACATAATATTCAGCTTTCAGACAGGATTTATCGCCCCATCATCTCGAGTCTTCGGTCGAGGGGCGTTAGTCCACGATCCTTCTGCTATAGCGAAAAGATACTTATCTTCCTACTTCCTGGTTGACATTTTGTCGATTCTTCCATTGCCACAAGTTGCAATTCTGTTTATTGTTCCTTCGAGTAGAGGGCCGCATCCGATGGTGACAAAGGAGATGTTGATGTACATCATTTTCTTGCAGTACATTCCAAGACTTTTTCGGATTTATCCATTGTTCGAAGAAGTAACTACTTCTTCCGGGATACTTACCGAAACTGCTTGGGGTGGAGCTGCATTAAATCTTCTCCTTTATTTACTAGCAAGTCACATTGTCGGGGCGTGTTGGTACTTATTTTCGGTGGCACGGGAAGAACAATGTTGGCTTGACGAGTGTAGTAAGACGAAGCAATGTAACAGCACGTTGTTGTATTGCCAAGGAAACTCTCTGAGGAAAGCTGGTAATCCATTCAAGGATCTGTGTAAGCTTACCAAACCCGACGACATAAAAGATCCTGGCGAATTCAACTTTGGGATATTCTTTGATGCCCTAAAGTACCAAATTGTGCAGTCGAAGGATTTCCGTAGGAAGTTCTCGTATTGTTTCTGGTGGGGTCTCCGAAACGTTAGTTCTTTGGGATCGAATCTTCAAACCAGCACTTTCCCAGGGGAGATCGCCTTTGCCGCATCAATAACAATTTTTGGTTTGATTTTGTTTGCGTTGCTCATTGGAAATATGCAGAAATATTTGGAATCGACAACGTTGAGAATAGAAGAGATGAGGCTGAGAAGACGGGATGCAGAGCATTGGATGTCTCACCGTATGCTCCCAGAACATTTGAGGGACCGACTAAGACGGTACGAACAATACAAATGGCAGGAAACCAGGGGCGTAGAGGAAGATGGTTTAGTCTCGAAGCTTCCGAAAGACCTACGCAGAGACATTAAACGACACCTTTGCTTGGATCTTCTAATGAAAGTGCCCCTATTTCAAACTATGGATGAACAGCTAGTAGATGCTATGTGTGAGTGTCTCAAACCAATGTTGTACACAGAAAATAGCTCAGTCATTCGAGAGGGTGATCCAGTTGATTTGATGCTATTTATTATGAGAGGAAATTTGAAAACTACAACAACATATGGTGGAAAAGCTGGATTTTTCAACACTGCTAAACTAAAACCAGGAGATTTCTGTGGAGACGAGCTTCTTACCTGGGCATTGGATCCAACTCCAAGTTCCTCAACAACACTTCCCTGCTCGACTAGGACAGTAGAGTCTCTCACAGAGGTTGAGGCTTTTGCCTTAAAGGCCGAAGACTTGAAGTCCGTGGCTTCCCAATTTAGACGTCTTCACAGCAAACAGCTCCAACACACATTCAGATTCTACTCCCTGCAATGGAGAACATGGGCCGCCTGCGTTATACAAGGATCTTGGAAATGGTACCTGAATAAGAAGTACGCGAAGACGCTACAAGAAGCAGAAAACCGACTACAAAACATTCTGAGAAATAATGCAGGTACCTCAACGAGGCTTAGCTTTCGTGCCTCCATTTTTGCAGCTCGTTTCGCGGCCAATTTACTTGGATCGCGACGAGGAGTTGGAAGCCAGACCAGATTTTCGCCCATCCCCGCCATCCCTCCTCAGCGGCCATCGGAGCCTGATTTCACTTCCTAG 2070 44.49 SDYTIRNGEKVYLGRAIPSLGVVLESIQRGFKSRSETTAKKDRVQGEESENQKRIFDPQGPFLQKWNKIFVISCLIAAALDSLFLYIPVMDGDRKCLAMDRPLEITACVLRSFIDLFYILHIIFSFQTGFIAPSSRVFGRGALVHDPSAIAKRYLSSYFLVDILSILPLPQVAILFIVPSSRGPHPMVTKEMLMYIIFLQYIPRLFRIYPLFEEVTTSSGILTETAWGGAALNLLLYLLASHIVGACWYLFSVAREEQCWLDECSKTKQCNSTLLYCQGNSLRKAGNPFKDLCKLTKPDDIKDPGEFNFGIFFDALKYQIVQSKDFRRKFSYCFWWGLRNVSSLGSNLQTSTFPGEIAFAASITIFGLILFALLIGNMQKYLESTTLRIEEMRLRRRDAEHWMSHRMLPEHLRDRLRRYEQYKWQETRGVEEDGLVSKLPKDLRRDIKRHLCLDLLMKVPLFQTMDEQLVDAMCECLKPMLYTENSSVIREGDPVDLMLFIMRGNLKTTTTYGGKAGFFNTAKLKPGDFCGDELLTWALDPTPSSSTTLPCSTRTVESLTEVEAFALKAEDLKSVASQFRRLHSKQLQHTFRFYSLQWRTWAACVIQGSWKWYLNKKYAKTLQEAENRLQNILRNNAGTSTRLSFRASIFAARFAANLLGSRRGVGSQTRFSPIPAIPPQRPSEPDFTS 689
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 22890356 22893150 + Bpe018440.1 Bpe05g01029 104806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g01029 689 ProSiteProfiles cAMP/cGMP binding motif profile. 461 547 IPR000595 -
Bpe05g01029 689 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 10-RELATED 33 688 - -
Bpe05g01029 689 SMART cnmp_10 461 594 IPR000595 -
Bpe05g01029 689 Gene3D Jelly Rolls 459 581 IPR014710 -
Bpe05g01029 689 Coils Coil 615 642 - -
Bpe05g01029 689 Pfam Ion transport protein 66 386 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe05g01029 689 SUPERFAMILY Voltage-gated potassium channels 57 383 - -
Bpe05g01029 689 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 33 688 - -
Bpe05g01029 689 Gene3D Helix hairpin bin 388 452 - -
Bpe05g01029 689 MobiDBLite consensus disorder prediction 664 689 - -
Bpe05g01029 689 SUPERFAMILY cAMP-binding domain-like 391 586 IPR018490 -
Bpe05g01029 689 Gene3D - 69 384 - -
Bpe05g01029 689 CDD CAP_ED 461 594 IPR000595 -
Bpe05g01029 689 Pfam Cyclic nucleotide-binding domain 482 578 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g01029 Bpe-Chr5:22890356 Bpe10g00594 Bpe-Chr10:12858504 0 dispersed
Bpe05g01029 Bpe-Chr5:22890356 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g01029 K05391 - cit:102618760 848.58