Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g01037 CTAACCACTGGAAATATGACGTCCCCTAAGGCCTCGTCGGAGCCTTCTTCCGCGCCGATCCCCGGCGAAATTGTTCAGGATTCTGATAAAAATATTGGCGGCACTCGTCACCCGACGTACCGTGGGGTAAGGAAACGGCGGTGGGGGAAATGGGTGTCTGAAATTCGGGAGCCACGCAAAAAAACACGCATTTGGCTTGGATCTTTCCCGGCGCCGGAAATGGCTGCGAAGGCCTACGACGTCGCTGCTTACTGCTTGAAAGGTCCGAAAGCGAAGCTGAATTTCCCCGATGAGGTCGAGTTACTGCCACTGCCGGCTTCTTGTACTGCTCGGGAAATTCAAGCCGCAGCGGCAAAGGCTGCGAGTATGATTATGATTCCAAGGATGGTGACGGCAGACGACAAAGTATTGGAAGGCACCATGGACGGAGAAGGAGACGAAGATGATTTCTGGGGGGAAATTGAGTTGCCGGAGTTGATGGATAGTGGGTTATATTGGGATAGAATTCATTAA 513 52.44 LTTGNMTSPKASSEPSSAPIPGEIVQDSDKNIGGTRHPTYRGVRKRRWGKWVSEIREPRKKTRIWLGSFPAPEMAAKAYDVAAYCLKGPKAKLNFPDEVELLPLPASCTAREIQAAAAKAASMIMIPRMVTADDKVLEGTMDGEGDEDDFWGEIELPELMDSGLYWDRIH 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 22946413 22946925 + Bpe018449.1 Bpe05g01037 104814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g01037 170 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Bpe05g01037 170 CDD AP2 40 97 IPR001471 GO:0003700|GO:0006355
Bpe05g01037 170 MobiDBLite consensus disorder prediction 1 15 - -
Bpe05g01037 170 PRINTS Ethylene responsive element binding protein signature 78 98 IPR001471 GO:0003700|GO:0006355
Bpe05g01037 170 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Bpe05g01037 170 Pfam AP2 domain 38 88 IPR001471 GO:0003700|GO:0006355
Bpe05g01037 170 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF023 13 164 - -
Bpe05g01037 170 MobiDBLite consensus disorder prediction 1 39 - -
Bpe05g01037 170 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Bpe05g01037 170 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Bpe05g01037 170 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 164 - -
Bpe05g01037 170 SUPERFAMILY DNA-binding domain 39 98 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g01037 Bpe-Chr5:22946413 Bpe02g02241 Bpe-Chr2:23387605 1.05E-35 dispersed
Bpe05g01037 Bpe-Chr5:22946413 Bpe01g00552 Bpe-Chr1:3582125 1.34E-37 transposed
Bpe05g01037 Bpe-Chr5:22946413 Bpe08g00494 Bpe-Chr8:3241344 1.18E-37 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21502 PF00847 AP2 1.50E-13 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g01037 K09286 - zju:107423644 202.216