Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe05g01038 | ATGGAGAAAGAGGATCTGTTTTCCGAGCTATGGCAAGCTTGCGCAGGGCCACTGGTAGACGTTCCTCGTCGAGGAGAAAGAGTTTTCTACTTTCCTCAGGGTCACTTAGAACAACTGGAGGCGTCAACAAATCAGCAGCTGAATCAGAAAATTCCTCGTTTTGATCTGCCTTCCAAGATTCTCTGTCGTGTTGTTGACATTCAATTGATGGCAGAAAAAGAAACTGATGAGGTTTACGCTCAGATCACTCTGCTTCCAGAAATAGATCAGAGTGAGCCTGAAAGTCCAGATCCCAATCCGGACGAATGCCCGAGGCATACAATCCATTCATTTTGCAAGATTTTGACAGCTTCTGATACAAGCACTCACGGTGGATTCTCAGTTTTACGGAAGCACGCCACGGATTGCCTGCCTTCTCTGGACATGAGCCAGCCTATACCGACTCAAGAATTAGTTGCCAAAGATCTTCATGGGTACGAGTGGAGATTTAAACATATTTACAGAGGTCAACCTCGAAGGCATTTGCTCACTACGGGATGGAGTACTTTTGTGACTTCGAAGAGACTACTAGCAGGCGACGCCTTTGTGTTTTTAAGGGGCGATAACGGGGAGTTAAGGGTTGGAGTTCGTCGCCATGCTCGTCAACAGGCTCCAATGCCGGCATCTGTGATATCCAGTCACAGCATGCATCTTGGAGTTCTCGTCACTGCCTCACATGCTTTTCGAACTCAAACGCGTTTCGTCGTTTATTACAAGCCGAGGACAAGCCAATTCATTATTGGCTTCAACAAATATCTTGAATCCGTAAAGAACGGGTTTTCGATTGGGATGCGTTTTAAGATGCAGTTTGAGGGAGAGGAATCTTCAGAAAGAAGGTTTACAGGAACTATTGTTGGAGTCGGAGATATTTCTCCTCAGTGGTCCGATTCTAAATGGCGATCATTGAAGATTCAATGGGACGAGCCTTCAACCATTCCTAGGCCGGAGAGGGTCTCTTCTTGGGAGATAGAACATTTTGTGCCTTCTGCTTCATTAAGCTTTGGTCAACCCATCACGAAAAGTAAACGGGTCAGGCCAGTCGAAATACCATCTTCTGAATTAACTTCTGGAACGCATGCTTCATCGTTTTGGTACCATGGATCGACTCCTCCCAATGATGGGCCCCAGCCACGGAATATTTTGGAAGTCCATCCGAGGCAGACCGACGGTGGAAACTGGACATCTTCCCCTTGTCTTAATGTCTCGCTAAACCTTTTCACGGACTCTATAGGGGACAAAGAGTATGGACCATCTCGATCCATTCTCTCTGAGTATGTTTCTCCGACATCCCCATGTCCGAAAAATAGTGTTCCACTAAATAGTCAGTCACATAAAGATCATAAATCAAATACTTCTCCTTGCTGCCGACTGTTCGGAATTGATTTGTTAAAAAACTCGAACAGCACTTTGCATGTTGAGAAACCTTCACCGTGCACAACAATGGCCACCAGTGGGATCAAAGAGCCCGTTTCAGATGCTTTTCAAGCCAATACATCACCAAAAGAGGTGATAAGCCAAAAAGGTAACAATCTGGCCTCGAGAATTCGTACGAAGGTTCAAATGCAAGGCATGGCTGTTGGTCGGGCTGTCGACTTGGCAACCTTCAAAGGATACGACCATCTTATAGAAGAGCTCGAGAATATATTTGAAATTAAAGGAGAGCTTCATTCGCAAGAAAAATGGGCAGTTGTTTTTACCGATGATGAAAACGACATGATGCTCGTGGGGGACGATCCATGGCCAGAATTCTGTAAAATGGTGAAGAAAATATGCATTTTTTTGAGGGAAGAAGTGAAGAAGATGGGTTCTAAACTGGAGCTCCCTCCACCATCACCACCACCACCACCACCGTCACCGTTAGACTGTCAAACGACTGTTCTGAGCTTGGATTAA | 1932 | 45.55 | MEKEDLFSELWQACAGPLVDVPRRGERVFYFPQGHLEQLEASTNQQLNQKIPRFDLPSKILCRVVDIQLMAEKETDEVYAQITLLPEIDQSEPESPDPNPDECPRHTIHSFCKILTASDTSTHGGFSVLRKHATDCLPSLDMSQPIPTQELVAKDLHGYEWRFKHIYRGQPRRHLLTTGWSTFVTSKRLLAGDAFVFLRGDNGELRVGVRRHARQQAPMPASVISSHSMHLGVLVTASHAFRTQTRFVVYYKPRTSQFIIGFNKYLESVKNGFSIGMRFKMQFEGEESSERRFTGTIVGVGDISPQWSDSKWRSLKIQWDEPSTIPRPERVSSWEIEHFVPSASLSFGQPITKSKRVRPVEIPSSELTSGTHASSFWYHGSTPPNDGPQPRNILEVHPRQTDGGNWTSSPCLNVSLNLFTDSIGDKEYGPSRSILSEYVSPTSPCPKNSVPLNSQSHKDHKSNTSPCCRLFGIDLLKNSNSTLHVEKPSPCTTMATSGIKEPVSDAFQANTSPKEVISQKGNNLASRIRTKVQMQGMAVGRAVDLATFKGYDHLIEELENIFEIKGELHSQEKWAVVFTDDENDMMLVGDDPWPEFCKMVKKICIFLREEVKKMGSKLELPPPSPPPPPPSPLDCQTTVLSLD | 643 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 22955782 | 22959118 | + | Bpe018450.1 | Bpe05g01038 | 104815 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe05g01038 | 643 | MobiDBLite | consensus disorder prediction | 373 | 396 | - | - | |
Bpe05g01038 | 643 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 3 | 623 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Bpe05g01038 | 643 | Gene3D | - | 524 | 615 | - | - | |
Bpe05g01038 | 643 | PANTHER | AUXIN RESPONSE FACTOR 11 | 3 | 623 | - | - | |
Bpe05g01038 | 643 | ProSiteProfiles | PB1 domain profile. | 527 | 612 | IPR000270 | GO:0005515 | |
Bpe05g01038 | 643 | SMART | B3_2 | 111 | 213 | IPR003340 | GO:0003677 | |
Bpe05g01038 | 643 | ProSiteProfiles | B3 DNA-binding domain profile. | 111 | 213 | IPR003340 | GO:0003677 | |
Bpe05g01038 | 643 | SUPERFAMILY | DNA-binding pseudobarrel domain | 103 | 240 | IPR015300 | - | |
Bpe05g01038 | 643 | MobiDBLite | consensus disorder prediction | 619 | 634 | - | - | |
Bpe05g01038 | 643 | Pfam | AUX/IAA family | 520 | 563 | IPR033389 | - | |
Bpe05g01038 | 643 | Pfam | AUX/IAA family | 568 | 610 | IPR033389 | - | |
Bpe05g01038 | 643 | Gene3D | - | 272 | 344 | - | - | |
Bpe05g01038 | 643 | CDD | B3_DNA | 109 | 211 | IPR003340 | GO:0003677 | |
Bpe05g01038 | 643 | MobiDBLite | consensus disorder prediction | 373 | 388 | - | - | |
Bpe05g01038 | 643 | SUPERFAMILY | CAD & PB1 domains | 520 | 603 | - | - | |
Bpe05g01038 | 643 | Pfam | Auxin response factor | 237 | 316 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Bpe05g01038 | 643 | Pfam | B3 DNA binding domain | 111 | 212 | IPR003340 | GO:0003677 | |
Bpe05g01038 | 643 | MobiDBLite | consensus disorder prediction | 616 | 643 | - | - | |
Bpe05g01038 | 643 | Gene3D | - | 108 | 213 | IPR015300 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe04g00952 | Bpe05g01038 | CCT | |
Bpe04g00952 | Bpe05g01038 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe05g01038 | Bpe-Chr5:22955782 | Bpe08g00146 | Bpe-Chr8:773862 | 1.02E-21 | dispersed | |
Bpe06g00495 | Bpe-Chr6:16189131 | Bpe05g01038 | Bpe-Chr5:22955782 | 1.93E-112 | transposed | |
Bpe13g00184 | Bpe-Chr13:9759644 | Bpe05g01038 | Bpe-Chr5:22955782 | 7.15E-29 | transposed | |
Bpe04g00952 | Bpe-Chr4:6416456 | Bpe05g01038 | Bpe-Chr5:22955782 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21503 | PF02362 | B3 | 1.80E-21 | CL0405 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe05g01038 | K14486 | - | qsu:112005008 | 812.757 |