Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g01054 ATGGAAATTAAGCTGGAGAAGAGCAAGGACGAAGTTACGGACGACGGTTGCTGTACGGAGGTTGTCAGGTGGGAGAGGTTTCTTCCCAGGATGGCGCTGAGAGTTCTTCTTGTTGAAGCTGATGATTCCACGCGTCGGATAATTTCAGCGCTTCTCCGTAAATGCAGCTATAGAGTTACTGCTGTTTCTGATGGACTACAGGCGTGGGAAACTATAAGGGTTAAACCTCAGAGTATAGATATAATAATGACGGAGGTGGATTTGCCATCAATATCCGGATATGCTCTTCTTACTCTAGTGATGGAACATGAAGTTTGCAAAAACATTCCGGTTATAATGATGTCCTCTCAAGATTCAGTTAGCACGGTCTTCAAGTACATGTTGAGAGGCGCTGTTGACTTTCTTGTTAAACCTCTTAGGAGCAATGAGCTGAGGAACCTGTGGCAGCATGTTTGGAGGAGGCAGAGTAATGGTGCCAATACTACTTGTAAAGCTGTGGCATCTCTCGAGAATAATGCAGTGAGCAATTATTCAAGCGATCTTGCATCATCCAGACAGAAACAGAAGGAATGCAGTGAGAAGGAGGGCGATACTCAAAGCTCATGTACAATGCCTCATGTGGAAGCTGAAAGTGCATACGTACCAAACATGCAGGGCTTTCCCAATTTAAAGAGTCAAAGTTCCTCTATTTTGAGCAACACTGGAGAGCCAGAGCATGATCATAGTGGTGTTATGGAAGGCAGAACTGGAGGATCTGATATGCATACAGACAAGGAAATTCTCGCTGGTGGAGTTAATAGTTGTGATGATGAATGCAATGAACTTTCCTCTAGAGCCATTGATCTGATAGCGACAATAGATTTCAAACAGAAGTGCATGGAAGGAGTATTCGATTATGAAAAAATCCAATCTGCTCCAAAATTGGAACTTTCTTTGAGGCGGACATATCCAAGTTCATATACCCAAGGAACTGATGAAATGAAATCACTGAACCATTCTAATGCTTCAGCATTTTCATTGTATACTGGTAGTAAGACATGGCAGCCTCGTCCACTTCATATCCTATCTACTGATTCTCATAAATCTGAAGATGGACCTGAACCATCCTCGAGTAAAATCACTCCAGATGAATGTACTTTTCCAAGGCACCGTACAAGTAATAAAGGAAATGCAGAAAACCGAGAATCTGATAATTCAGTTCCAAGCATTGATTTTGATAATGTAGGTGCTGGATACAATCACGCAGTTCAATCCAGATTTTTTGCTCAATATGGATTATCCACTGGGTGGAATACCAGACAAACCAGTGAGCAAGAGCAACACCTATTTACCATGGGAGTCCTTAAACAGCCCAATCCTGAAAATGAAAGCATAAAACAAGTTTATCTTCAATCACCAAATGCTATGAGTAACTCGATGGAGCAAACTGAGCCTGAAAAGAATGTAATAAAGCCTTCAGAAACACCTAGACACGATTCTCCTGCTCGACCTCGTAGTTCAAGCAGTACTTTATGTAATGAAACTTCAGATCACAATTGGCAGGAGGCAGTTGAGATGGCTGCTGCAAAGGTTGAGAGTTTAAACGACATTGGTTTTAGAGGGCCTCACTCTGGCTCGCTATTCATGACCCAGAGGGAAGCTGCTTTAACCAAGTTCCGATTGAAGCGGAAAGATCGATGCTATGGAAAAAAGGTTCGATATCAAAGCCGGAAAAGATTGGCGGAGCAGCGGCCGAGAGTAAAGGGGCAGTTTGTGCGACAAATAAAGGCAGACCCACCAATCACCGAAGCAAGATGTTCATGA 1803 42.87 MEIKLEKSKDEVTDDGCCTEVVRWERFLPRMALRVLLVEADDSTRRIISALLRKCSYRVTAVSDGLQAWETIRVKPQSIDIIMTEVDLPSISGYALLTLVMEHEVCKNIPVIMMSSQDSVSTVFKYMLRGAVDFLVKPLRSNELRNLWQHVWRRQSNGANTTCKAVASLENNAVSNYSSDLASSRQKQKECSEKEGDTQSSCTMPHVEAESAYVPNMQGFPNLKSQSSSILSNTGEPEHDHSGVMEGRTGGSDMHTDKEILAGGVNSCDDECNELSSRAIDLIATIDFKQKCMEGVFDYEKIQSAPKLELSLRRTYPSSYTQGTDEMKSLNHSNASAFSLYTGSKTWQPRPLHILSTDSHKSEDGPEPSSSKITPDECTFPRHRTSNKGNAENRESDNSVPSIDFDNVGAGYNHAVQSRFFAQYGLSTGWNTRQTSEQEQHLFTMGVLKQPNPENESIKQVYLQSPNAMSNSMEQTEPEKNVIKPSETPRHDSPARPRSSSSTLCNETSDHNWQEAVEMAAAKVESLNDIGFRGPHSGSLFMTQREAALTKFRLKRKDRCYGKKVRYQSRKRLAEQRPRVKGQFVRQIKADPPITEARCS 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 23071790 23075861 + Bpe018467.1 Bpe05g01054 104831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g01054 600 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 578 IPR045279 GO:0009736
Bpe05g01054 600 ProSiteProfiles CCT domain profile. 545 587 IPR010402 GO:0005515
Bpe05g01054 600 Pfam CCT motif 545 587 IPR010402 GO:0005515
Bpe05g01054 600 MobiDBLite consensus disorder prediction 355 402 - -
Bpe05g01054 600 MobiDBLite consensus disorder prediction 178 203 - -
Bpe05g01054 600 MobiDBLite consensus disorder prediction 470 506 - -
Bpe05g01054 600 SMART REC_2 33 148 IPR001789 GO:0000160
Bpe05g01054 600 Pfam Response regulator receiver domain 35 146 IPR001789 GO:0000160
Bpe05g01054 600 MobiDBLite consensus disorder prediction 239 255 - -
Bpe05g01054 600 Gene3D - 31 208 - -
Bpe05g01054 600 SUPERFAMILY CheY-like 33 156 IPR011006 -
Bpe05g01054 600 MobiDBLite consensus disorder prediction 377 391 - -
Bpe05g01054 600 MobiDBLite consensus disorder prediction 480 494 - -
Bpe05g01054 600 ProSiteProfiles Response regulatory domain profile. 34 152 IPR001789 GO:0000160
Bpe05g01054 600 CDD psREC_PRR 35 138 - -
Bpe05g01054 600 MobiDBLite consensus disorder prediction 224 257 - -
Bpe05g01054 600 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5 17 578 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00969 Bpe05g01054 CCT
Bpe04g00969 Bpe05g01054 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00712 Bpe-Chr4:4590224 Bpe05g01054 Bpe-Chr5:23071790 1.54E-45 dispersed
Bpe05g01054 Bpe-Chr5:23071790 Bpe15g01310 Bpe-Chr15:21341436 1.45E-15 dispersed
Bpe07g00775 Bpe-Chr7:14232191 Bpe05g01054 Bpe-Chr5:23071790 2.84E-14 transposed
Bpe04g00969 Bpe-Chr4:6618978 Bpe05g01054 Bpe-Chr5:23071790 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21507 PF00072 Response_reg 6.50E-19 CL0304 Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g01054 K12130 - qsu:112004762 487.648