Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g01055 ATGGATTCACAGTCATCCCATCACGGACAGATTATTGAAATTAGAGGTCCCATTGCAGATGTTGAAAGACGCCTTGGACGAAGTAAGATCTGTGGAGATGTGCCATGTGGTTTCTCAGATCCAGGCTCCACTTCAAACGATGCGAAAGAACGGTCATCTTCTATGCGGAAGCTGTTGATTGCAGTTGCACTCTGTGTGTTGTTCATGAGCATAGAAGTTGCTGGTGGGATAAAAGCTAATAGTCTTGCTATCCTCACTGATGCAGCACATTTGCTTTCAGATGTTGCATCTTTTGCCATCTCCTTGTTTTCTTTATGGGCTGCTGGTTGGGAAGCTACTCCTCGCCAATCTTACGGCTTCTTCAGGATCGAGATTCTTGGTGCTCTGGTTTCAATGCAACTCATATGGCTGATAGCAGGAATATTGGTCTATGAGGCTATTTTTAGGCTTATTCACAACACGGGTGATGTAAATGGCTTTTTGATGTTTATCATTGCTTCGTTTGGTCTTGTGGTTAACATCTCCATGGCTTTGTTGTTGGGCCATGATCATAGCCATGGACATGACAATCATGGTCATGGTGTTGGGCATAGCCATGGTGGTGTGACAGTTTCTACTCATCATCACGTGCACGATCATTCTCACGATCACGCTCATCAGCATACTCACGATCACGCCCAGCCGTTGCTTGATGAACCAAAAGATGCAACGAAAAAGAAGAAAGGGCGGAACATAAATCTGCAGGGGGCATATCTCCATGTGCTTGGAGACTCAGTACAGAGTATTGGAGTGATGATAGGAGGTGCAATTATATGGTACAAACCCGAGTGGAAGATAGTAGACTTGATTTGCACATTGATATTTTCGGTCGTCGTTTTAGGGACTACATTCAAGATGCTCCGAAGCATACTTGAAGTCTTGATGGAGAGCACACCGAGAGAAATCGATGCAACACGGCTGGAGTCAGGGCTACTAGAGATGGAAGAAGTGGTGGCCATTCATGAACTGCATATCTGGGCCATCACTGTCGGAAAAGTCCTCCTCGCGTGCCATGTCAAAATCCAACCAGACGCTGATGCAGAACGGGTATTGGACAAAGTGGTGGACTACATCAGAAAAGAATACAACATCAGCCATGTTACTGTCCAGATCGAGCGCTAA 1161 45.56 MDSQSSHHGQIIEIRGPIADVERRLGRSKICGDVPCGFSDPGSTSNDAKERSSSMRKLLIAVALCVLFMSIEVAGGIKANSLAILTDAAHLLSDVASFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSMQLIWLIAGILVYEAIFRLIHNTGDVNGFLMFIIASFGLVVNISMALLLGHDHSHGHDNHGHGVGHSHGGVTVSTHHHVHDHSHDHAHQHTHDHAQPLLDEPKDATKKKKGRNINLQGAYLHVLGDSVQSIGVMIGGAIIWYKPEWKIVDLICTLIFSVVVLGTTFKMLRSILEVLMESTPREIDATRLESGLLEMEEVVAIHELHIWAITVGKVLLACHVKIQPDADAERVLDKVVDYIRKEYNISHVTVQIER 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 23078042 23079202 + Bpe018468.1 Bpe05g01055 104832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g01055 386 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 386 - -
Bpe05g01055 386 TIGRFAM CDF: cation diffusion facilitator family transporter 55 386 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bpe05g01055 386 PANTHER METAL TOLERANCE PROTEIN A1 1 386 - -
Bpe05g01055 386 Pfam Cation efflux family 58 308 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bpe05g01055 386 Gene3D Cation efflux protein transmembrane domain 54 307 IPR027469 -
Bpe05g01055 386 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 315 385 IPR036837 -
Bpe05g01055 386 SUPERFAMILY Cation efflux protein transmembrane domain-like 52 309 IPR027469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01477 Bpe-Chr2:18053017 Bpe05g01055 Bpe-Chr5:23078042 2.02E-10 dispersed
Bpe05g01055 Bpe-Chr5:23078042 Bpe08g00911 Bpe-Chr8:11560085 0 dispersed
Bpe05g01055 Bpe-Chr5:23078042 Bpe11g00379 Bpe-Chr11:2873385 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g01055 K14689 - zju:107423776 545.043