Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g01061 ATGGAGGAAGAAGAAGAAGATCATGAACGAGGAGCTTTATTTTATGATCATCTACCTGTTCCTTTCTCGAGTGGAGCTCAAACGATGATTAATGAAATGGGTTTTTCTCACTTTGAAGAAAACCAGGTTTTAAGCAGCTTCTTGACATCTTCTCATTCGTCTTCCCCTATTCTCCGGCCACCATCCGACGGTGTTGCAGGCTTCTCCACTCCTGATCGTGGAGTAGCCAGCAGAACCTTGGATGGAACTAGCTTTGTTAGTAGACCATCTCGGAATAAGGATCAAGAGGTGGAAACAGCAAATCGGAAGGCTATTAATCATGGCAACTGTAGCGGTAATGTAAGCGACGGAAGTAATTCATGGTGGAGAAGCTCAAATTCAGAGAAGAACAAAGTGAAAGCGAGGAGGAAGCTGAGAGAGCCGAGGTTCTGTTTCCAGACAAGAAGCGATGTGGATGTGCTTGACGACGGCTACAAATGGCGGAAATACGGCCAAAAAGTTGTCAAAAACAGCCTTCATCCAAGAGGTTACTATCGATGTACGTACAATTCTTGTAGAGTGAAGAAAAGGGTAGAACGACTATCAGAAGACTGCCGGATGGTGATTACGACGTACGAAGGAAGACATAACCACTCTCCTTGCGATGAGTCGAACTCATCTGAACCCGAATGTTTCTAA 678 44.84 MEEEEEDHERGALFYDHLPVPFSSGAQTMINEMGFSHFEENQVLSSFLTSSHSSSPILRPPSDGVAGFSTPDRGVASRTLDGTSFVSRPSRNKDQEVETANRKAINHGNCSGNVSDGSNSWWRSSNSEKNKVKARRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRGYYRCTYNSCRVKKRVERLSEDCRMVITTYEGRHNHSPCDESNSSEPECF 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 23120538 23121943 - Bpe018475.2 Bpe05g01061 104838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g01061 225 Pfam WRKY DNA -binding domain 155 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe05g01061 225 MobiDBLite consensus disorder prediction 51 133 - -
Bpe05g01061 225 SMART WRKY_cls 154 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe05g01061 225 SUPERFAMILY WRKY DNA-binding domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe05g01061 225 MobiDBLite consensus disorder prediction 102 127 - -
Bpe05g01061 225 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 24 224 - -
Bpe05g01061 225 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 224 IPR044810 GO:0003700
Bpe05g01061 225 MobiDBLite consensus disorder prediction 76 90 - -
Bpe05g01061 225 Gene3D WRKY domain 140 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe05g01061 225 ProSiteProfiles WRKY domain profile. 149 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g01061 Bpe13g00796 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g01061 Bpe-Chr5:23120538 Bpe13g00796 Bpe-Chr13:14336961 6.51E-85 dispersed
Bpe05g01061 Bpe-Chr5:23120538 Bpe13g00706 Bpe-Chr13:13646723 8.21E-33 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21509 PF03106 WRKY 2.10E-23 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g01061 - - jre:109016788 275.018