Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g01097 ATGCGGAGGTGGCTTTGTTGCAGTTGTCATGGGGATGAGCCATATGCATCAAATGAAAATGAGCGCCAAAAAGGTCCAACACACTATGCTGATGGCCATCCAAAGGCGAAGGTCCCCCCAACTGTTAAAACCGAAGTACAGAAGGCACCGCCAGCTATTGAGGTGCCTGCCTTATCTTCTGATGAACTCAAGGAACAGACTGATAATTTTGGTTCCAAATCATTGATTGGTGAAGGATCTTATGGGAGAGTATATTACGCTAGCCTAAGTAATGGGAAAGCTGTGGCCGTAAAGAAGCTTGATGTTTCATCTGAGCCTGACTCAAATGTTGAATTTTTGACTCAGGTTTCTATGGTATCGAGGTTGAAAAATGAAAATCTTGTTGAGTTGCTGGGTTATTGTGTTGAAGGAAATCTCCGTGTTCTTGCATATGAATTCGCAACCATGGGTTCTCTACATGACATATTGCACGGACGAAAGGGAGTGCAAGGGGCACAACCGGGGCCTGTGCTTGATTGGATGCAACGAGTAAAAATTGCCGTTGATGCAGCCAGAGGGCTGGAATACTTGCATGAGAAGGTTCAACCTTCAATTATACACAGAGATATAAGATCTAGCAATGTGCTTCTCTTTGAAGACTTCAAAGCAAAGGTTGCGGATTTCAACCTTTCGAATCAAGCTCCTGACATGGCTGCTCGGCTTCATTCTACTCGAGTCCTTGGAACCTTTGGATATCACGCTCCAGAATATGCTATGACTGGACAATTGACACAGAAGAGTGATGTGTATAGCTTTGGAGTCGTTCTCCTTGAGCTTCTCACTGGTAGAAAGCCTGTTGATCATACCATGCCTCGTGGACAGCAGAGTCTTGTTACTTGGGCTACTCCAAGGCTGAGCGAAGATAAAGTTAAACAATGTGTAGATCCAAAGCTGAAAGGCGAATATCCACCGAAGGGAGTTGCAAAGTTGGCGGCAGTGGCAGCCTTGTGTGTGCAGTATGAAGCCGAGTTCAGGCCAAACATGACTATAGTTGTCAAAGCGCTTCAACCCCTCCTCAAGCCTCCAGCCCCGGCCCCCGCTGCCGAATCTTGA 1092 46.34 MRRWLCCSCHGDEPYASNENERQKGPTHYADGHPKAKVPPTVKTEVQKAPPAIEVPALSSDELKEQTDNFGSKSLIGEGSYGRVYYASLSNGKAVAVKKLDVSSEPDSNVEFLTQVSMVSRLKNENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMQRVKIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKVADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMTIVVKALQPLLKPPAPAPAAES 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 23390222 23393087 - Bpe018512.1 Bpe05g01097 104874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g01097 363 Gene3D Transferase(Phosphotransferase) domain 1 148 355 - -
Bpe05g01097 363 Gene3D Phosphorylase Kinase; domain 1 41 146 - -
Bpe05g01097 363 Pfam Protein tyrosine and serine/threonine kinase 74 348 IPR001245 GO:0004672|GO:0006468
Bpe05g01097 363 ProSitePatterns Tyrosine protein kinases specific active-site signature. 198 210 IPR008266 GO:0004672|GO:0006468
Bpe05g01097 363 MobiDBLite consensus disorder prediction 15 38 - -
Bpe05g01097 363 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Bpe05g01097 363 CDD STKc_IRAK 76 351 - -
Bpe05g01097 363 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 356 - -
Bpe05g01097 363 SUPERFAMILY Protein kinase-like (PK-like) 50 348 IPR011009 -
Bpe05g01097 363 ProSiteProfiles Protein kinase domain profile. 70 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g01097 363 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 1 356 - -
Bpe05g01097 363 PIRSF ILK 22 354 - -
Bpe05g01097 363 MobiDBLite consensus disorder prediction 15 31 - -
Bpe05g01097 363 SMART tyrkin_6 70 348 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g01097 Bpe-Chr5:23390222 Bpe13g00731 Bpe-Chr13:13876432 0 dispersed
Bpe05g01097 Bpe-Chr5:23390222 Bpe04g00573 Bpe-Chr4:3640298 2.40E-172 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63369 PF07714 PK_Tyr_Ser-Thr 3.80E-46 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g01097 K13436 - oeu:111382281 612.068