Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00004 ATGGAAGTTACGTTGCTCAAAGTGCTGCTGAGCCACATCTCATCATTTTTCCAACTGTCTTCATGTGACAATATAAGATCAGAACCTGTGTTAAAGTATTATCAAAATACAGAAGAGATATTGAAATTGTTAAAACCAATACTTGATGCAGTTTTGAATTCAGAAACACCTTCTAAAGAAGCGGCAAACAAGTTATTCGAAGAACTCTGTTATTCTGTCGGTGAACTGAAAGAGCTATTTCAAAAGTGGCAGTCATTGTCAAGTAAATTATATTTCGTTTTGCTAACTGATACATTGATTTCAAGGATTCAGAAAATCAGCCTTGATCTTTTTCAGTTTCTTCAGGCATCTCATGAAGATATCTTTGTTGAATCAAACTCATCTCTCGAGCAATGTGTTCAGAAAATAAGGTACGTCAGACATGAACAGTCCTCAACTGTTTTTAAAGATGTTCTTAGAGATCAAGTGGAGGGTGTTGCACCTAGTTCAGAGGTATTGGCAAAAATTGCAGGATGCTTGAACTTAAGGTCTAACCAGGAAGTTCTAATTGAGGCTGTAGCGCTTGAGAAGTTGAAAGAGAGTGCTGAGCAAGCTGAAAAGAATGGAGAAGCTGAATATATCGAACAAATGATTGCTCTTGTAACATGCATGCATGAGCGCCTTTTGACGATGAAGCAGAGCGAGAACTATAGCCCAGTTTCAATACCTCCTGATTTCTGCTGTCCTCTGTCCCTTGATCTGATGACAGATCCGGTGATTGTATCCTCAGGACAAACGTATGAGCGAGCTTTTATCAAGGATTGGATTGATCTTGGGCTTACTGTTTGTCCTAAGACTCGGCAGACATTAGCTCACAGTAATCTAATACCCAATTACACTGTTAAGGCATTGATTGCAAACTGGTGCGAGTCAAACAATGTGAAGCTTCCTGATCCCTTGAAGTCTGTGAGTGCAAACCAGCCCTCTCCCCTTCTTGGCAACAGAAACACTGTGGTACCCCGAGACTCACCAGTGTTCCCTTATAATAGAAACTATCCACCAATGTCCCCAGAATCAACTCGGTATGAAGGGTCTCCCGCTAACATCTTAAGTTCGCCAGGTAGGAACCTGCCCCAGCCAGATAATTCCTTACCTTCTGTTCCTGTAAATGTTCTGGGGTTGGATACTGAGAGAGTGTCGCTTACAACATCGGAAGATAGTGTAGATACGTTGGAGGATGACAATTTAGTTATCCAATCTTCTATTACACCAATAAAAACAGATTTTCACGGTGCTTCAGAATTGCCTCACAGCCATTCTAGAGCGTCCTCTTCGTCCAATGCAGTTACTGATTTTCCTCGAGAAGTTTCAGAAGATGCCGTAGCCTCACTGGTTTCAACTATGACAGGATGCGCTGCTGATGCCTCTGCAGAGGTAAAAGTAGAGCCGCCAAAGCCTGATGCATTGACAAACACTTCACACAGAGAATCTGATCAGTTTCCTCCTAAACTAATGGAGACAAGATCACGAAGTCAAAATCTGTGGCGCCGACCATCTGAAAGGTTTATACCTAGAATAGTTTCTTCTTCTTCTTCTTCTATTGAAACTAGGCCAGATCTTTCTGGTGTTGAAGCCCAGGTTGAGAAGCTGGCTGAGGACTTGAAAAACCCTTCACTAGAGACTATAAGAGCGGCAGCTGCAGAAATACGGCTACTAGCCAAGCACAATATGGATAACCGGATTGTGATTGCAAAGTGTGGGGTCATTACCTTGTTAGTTGATTTGCTCACGTCGACAGACCCAGAAATCCAGGAGCATGCTGTGACAGCTCTTCTTAACTTATCAATCAATGATAACAATAAAACAATCATTGCCCAAGCCAACGCAATTGAACCCCTCATCCAAGTTCTTCAAACTGGGAGCCCTGAAGCAAAGGAGAATTCAGCGGCCACTCTCTTTAGCCTGTCAGTGATTGAAGAAAACAAAATAAAGATTGGAAGGTCAGGGGCAATAGTACCTCTTGTTGATTTGCTGGGAAATGGGACTCCAAGGGGAAAGAAAGATGCTGCAACCGCGCTGTTTAATTTGTCAATATTTCATGAAAACAAGGCAAGAATTGTACAAGCTGGCGCTGTAAAACATCTGGTAGAGTTGATGGATCCAGCAGCTGGAATGGTGGACAAAGCAGTCGCTGTGTTGGCCAATCTTGCCACGATACCTGAGGGAAGAACAGCAATCGGTCAGGAGGGTGGAATCCCTGTGCTTGTGGAGGTTGTTGAGCTCGGTTCTGCTAGAGGGAAGGAGAATGCAGCTGCCGCATTGTTGCAGCTGTGCACAAGTAGCAATAGATTCTGCAGTCAGGTTCTTCAGGAAGGAGCAGTCCCTCCATTAGTGGCATTGTCACAATCTGGCACTCCCAGGGCAAGAGAAAAGGCACAAACACTTCTAAGGTATTTCAGAAACCACAGACACGGTGGTGCAGGGAGAGGCTGA 2472 43.61 MEVTLLKVLLSHISSFFQLSSCDNIRSEPVLKYYQNTEEILKLLKPILDAVLNSETPSKEAANKLFEELCYSVGELKELFQKWQSLSSKLYFVLLTDTLISRIQKISLDLFQFLQASHEDIFVESNSSLEQCVQKIRYVRHEQSSTVFKDVLRDQVEGVAPSSEVLAKIAGCLNLRSNQEVLIEAVALEKLKESAEQAEKNGEAEYIEQMIALVTCMHERLLTMKQSENYSPVSIPPDFCCPLSLDLMTDPVIVSSGQTYERAFIKDWIDLGLTVCPKTRQTLAHSNLIPNYTVKALIANWCESNNVKLPDPLKSVSANQPSPLLGNRNTVVPRDSPVFPYNRNYPPMSPESTRYEGSPANILSSPGRNLPQPDNSLPSVPVNVLGLDTERVSLTTSEDSVDTLEDDNLVIQSSITPIKTDFHGASELPHSHSRASSSSNAVTDFPREVSEDAVASLVSTMTGCAADASAEVKVEPPKPDALTNTSHRESDQFPPKLMETRSRSQNLWRRPSERFIPRIVSSSSSSIETRPDLSGVEAQVEKLAEDLKNPSLETIRAAAAEIRLLAKHNMDNRIVIAKCGVITLLVDLLTSTDPEIQEHAVTALLNLSINDNNKTIIAQANAIEPLIQVLQTGSPEAKENSAATLFSLSVIEENKIKIGRSGAIVPLVDLLGNGTPRGKKDAATALFNLSIFHENKARIVQAGAVKHLVELMDPAAGMVDKAVAVLANLATIPEGRTAIGQEGGIPVLVEVVELGSARGKENAAAALLQLCTSSNRFCSQVLQEGAVPPLVALSQSGTPRAREKAQTLLRYFRNHRHGGAGRG 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 76505 80592 + Bpe019450.1 Bpe06g00004 104942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00004 823 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 662 704 IPR000225 GO:0005515
Bpe06g00004 823 MobiDBLite consensus disorder prediction 469 494 - -
Bpe06g00004 823 MobiDBLite consensus disorder prediction 423 442 - -
Bpe06g00004 823 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 7 819 - -
Bpe06g00004 823 Coils Coil 178 208 - -
Bpe06g00004 823 SUPERFAMILY RING/U-box 222 312 - -
Bpe06g00004 823 MobiDBLite consensus disorder prediction 319 355 - -
Bpe06g00004 823 SUPERFAMILY ARM repeat 540 812 IPR016024 -
Bpe06g00004 823 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 580 622 IPR000225 GO:0005515
Bpe06g00004 823 CDD RING-Ubox_PUB 239 281 IPR045210 -
Bpe06g00004 823 Pfam Armadillo/beta-catenin-like repeat 610 649 IPR000225 GO:0005515
Bpe06g00004 823 Pfam Armadillo/beta-catenin-like repeat 571 608 IPR000225 GO:0005515
Bpe06g00004 823 Pfam Armadillo/beta-catenin-like repeat 653 690 IPR000225 GO:0005515
Bpe06g00004 823 Pfam U-box domain 235 305 IPR003613 GO:0004842|GO:0016567
Bpe06g00004 823 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 703 744 IPR000225 GO:0005515
Bpe06g00004 823 Gene3D - 520 817 IPR011989 -
Bpe06g00004 823 PANTHER U BOX DOMAIN-CONTAINING 7 819 - -
Bpe06g00004 823 SMART Ubox_2 238 301 IPR003613 GO:0004842|GO:0016567
Bpe06g00004 823 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 234 309 IPR013083 -
Bpe06g00004 823 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 621 663 IPR000225 GO:0005515
Bpe06g00004 823 ProSiteProfiles U-box domain profile. 234 308 IPR003613 GO:0004842|GO:0016567
Bpe06g00004 823 SMART arm_5 610 650 IPR000225 GO:0005515
Bpe06g00004 823 SMART arm_5 651 691 IPR000225 GO:0005515
Bpe06g00004 823 SMART arm_5 569 609 IPR000225 GO:0005515
Bpe06g00004 823 SMART arm_5 732 772 IPR000225 GO:0005515
Bpe06g00004 823 SMART arm_5 692 731 IPR000225 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe06g00004 Bpe15g00315 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02003 Bpe-Chr2:21730492 Bpe06g00004 Bpe-Chr6:76505 2.87E-06 dispersed
Bpe03g00897 Bpe-Chr3:28739419 Bpe06g00004 Bpe-Chr6:76505 1.94E-11 dispersed
Bpe06g00004 Bpe-Chr6:76505 Bpe11g00764 Bpe-Chr11:5755923 3.83E-11 dispersed
Bpe09g00301 Bpe-Chr9:2419241 Bpe06g00004 Bpe-Chr6:76505 1.02E-10 dispersed
Bpe11g00998 Bpe-Chr11:7427223 Bpe06g00004 Bpe-Chr6:76505 1.70E-19 dispersed
Bpe02g01921 Bpe-Chr2:21166080 Bpe06g00004 Bpe-Chr6:76505 3.23E-11 transposed
Bpe05g00020 Bpe-Chr5:485155 Bpe06g00004 Bpe-Chr6:76505 6.31E-88 transposed
Bpe05g00776 Bpe-Chr5:21094886 Bpe06g00004 Bpe-Chr6:76505 1.05E-11 transposed
Bpe06g00419 Bpe-Chr6:15581888 Bpe06g00004 Bpe-Chr6:76505 2.33E-61 transposed
Bpe07g00665 Bpe-Chr7:13360361 Bpe06g00004 Bpe-Chr6:76505 1.26E-34 transposed
Bpe11g01228 Bpe-Chr11:9181884 Bpe06g00004 Bpe-Chr6:76505 6.94E-33 transposed
Bpe12g00464 Bpe-Chr12:10371471 Bpe06g00004 Bpe-Chr6:76505 2.57E-14 transposed
Bpe14g00995 Bpe-Chr14:7351103 Bpe06g00004 Bpe-Chr6:76505 1.56E-06 transposed
Bpe15g00171 Bpe-Chr15:12207958 Bpe06g00004 Bpe-Chr6:76505 3.33E-09 transposed
Bpe15g00315 Bpe-Chr15:14650719 Bpe06g00004 Bpe-Chr6:76505 0 transposed
Bpe02g01755 Bpe-Chr2:19899061 Bpe06g00004 Bpe-Chr6:76505 1.02E-24 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00004 - - tcc:18611233 1009.98