Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00015 ATGGATACGTTGTTTAGGTTGGTTAGTTTGCAGTCGGAGCAATCTTACAATTCTAGCAGAACTTCAAGCAGTTCAAGATCTTCTAGACAGAACAATAATCTCTACCGCCAGGAAGAAGAAGAAGAATGCTTCAACCTTTTCATGGATGAAGAAGACTTCTCGTCCTCTTCTTCAAAGCAATACAACTATCATAATCAGCTCCACCAATCCACTACCACTACCACTACCAACACCAGCACTCCAACTCCAACTGAATTCTCATTTTCTCCCTCGAATGACCTGAATTTCGAGTTTTCCGGCAAGTGGGCCACCGACATACTTCATGAAACCGGCCGAGCCATCGCGGATAAGAACACCGGGCGCCTGCAGCAACTGATGTGGATGCTCAACGAAATCAGCTCTCCTTACGGAGACACTGATCAGAAGCTGGCGGCGTATTTTCTGCAAGCTTTGTTCAGCCGGATGACGGATTCCGGTGACCGCTGCTACAGTACGTTAGCCGCTGCGTCGGAGAAAACGTGCTCTTTCGAATCAACGAGGAAGATGGTTCTAAAGTTTCAGGAAGTTAGCCCCTGGACTACTTTTGGCCATGTTTCTTGTAATGGTGCAATAATGGAAGCTTTTGAAGGAGAGGCAAAGCTACACATAATCGACATCAGCAATACGTTTTGTACGCAGTGGCCTACTTTGCTGGAAACACTCGCAACTCGGACCGACGAGACACCGCATCTCCGGCTGACGACAGTGATGGCAGCGAAATCAGGCAGCGGCGGTGGAGGAATACTCGCGAATCAGAAGGTGATGAAGGAAGTAGGTTTAAGAATGGAGAAATTCGCTAGGCTCATGGGGGTGCCTTTCAAATTCAACGCCGTATACCATTCCGGAGACCTTTCCGACCTGAATTTATCGGAATTGGATATAAAAGAGGACGAAGCGATTGCCGTAAATTGCGTAGGCGGATTACACACAGTTCCGGGGATTAATAACCGGCGAGATATATTAATTTCATCGTTTCGGAGTTTAAGACCGAGGATAATTACTGTGGTTGAAGAAGAAGCAGATTTAGACGTCGGAGTTGAAGGGATTGATTTTTTAAAAGGGTTTCAAGAATGCGTTCGGTGGTTTAGGGTTTACTTTGAGATGTTGGAAGAAAGCTTCGGAAGAACGAGCAACGAGCGGTTGATGCTGGAGCGATTGGCGGGAAAAGCCATCGTCGACCTCGTGGCTTGCTCGCGGGCAGATTCAGTAGAGCGGCGGGAGTCAGCAGTACGGTGGGGTCGACGACTTCATGGGACTGGGTTGAGTCCGGTGGCGTTCAGCGATGAAGTTTGCGACGACGTACGAGCACTGTTAAGACGGTACAAAGAAGAGTGGACAATGAAGCAGGAATCAGAGGGCAGCGGGATATTCCTGATGTGGAAGGATCAGCCGGTGGTGTGGGCCAGTGCATGGCGGCCGTGA 1461 48.87 MDTLFRLVSLQSEQSYNSSRTSSSSRSSRQNNNLYRQEEEEECFNLFMDEEDFSSSSSKQYNYHNQLHQSTTTTTTNTSTPTPTEFSFSPSNDLNFEFSGKWATDILHETGRAIADKNTGRLQQLMWMLNEISSPYGDTDQKLAAYFLQALFSRMTDSGDRCYSTLAAASEKTCSFESTRKMVLKFQEVSPWTTFGHVSCNGAIMEAFEGEAKLHIIDISNTFCTQWPTLLETLATRTDETPHLRLTTVMAAKSGSGGGGILANQKVMKEVGLRMEKFARLMGVPFKFNAVYHSGDLSDLNLSELDIKEDEAIAVNCVGGLHTVPGINNRRDILISSFRSLRPRIITVVEEEADLDVGVEGIDFLKGFQECVRWFRVYFEMLEESFGRTSNERLMLERLAGKAIVDLVACSRADSVERRESAVRWGRRLHGTGLSPVAFSDEVCDDVRALLRRYKEEWTMKQESEGSGIFLMWKDQPVVWASAWRP 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 168811 170271 - Bpe019459.1 Bpe06g00015 104953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00015 486 Pfam GRAS domain family 106 485 IPR005202 -
Bpe06g00015 486 MobiDBLite consensus disorder prediction 16 32 - -
Bpe06g00015 486 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 485 IPR005202 -
Bpe06g00015 486 ProSiteProfiles GRAS family profile. 94 485 IPR005202 -
Bpe06g00015 486 MobiDBLite consensus disorder prediction 16 36 - -
Bpe06g00015 486 PANTHER PROTEIN SHORT-ROOT 1 485 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00899 Bpe-Chr4:6034639 Bpe06g00015 Bpe-Chr6:168811 2.24E-148 dispersed
Bpe06g00015 Bpe-Chr6:168811 Bpe10g00006 Bpe-Chr10:154097 0 dispersed
Bpe13g00121 Bpe-Chr13:7695356 Bpe06g00015 Bpe-Chr6:168811 8.88E-44 dispersed
Bpe15g00304 Bpe-Chr15:14527373 Bpe06g00015 Bpe-Chr6:168811 1.23E-44 dispersed
Bpe06g00015 Bpe-Chr6:168811 Bpe14g00729 Bpe-Chr14:5656426 2.44E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21525 PF03514 GRAS 2.60E-103 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00015 - - jre:109002462 712.605