Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00051 ATGGCGACAGACTTGGATAATTCCTCTACTGCTTCAGGCGAAGCTAGTGTTTCGTCCTCCGGAAATCAACCGCCACCCCCGAAATCAACCGCCAAGAAAAAGCGAAACCTACCGGGAATGCCAGATCCGGACGCTGAGGTAATTGCTCTGTCTCCGAAGACTCTCATGGCGACGAATCGATTCGTCTGTGAAATTTGCAGCAAAGGTTTTCAAAGGGATCAGAATTTACAGCTGCATCGAAGAGGTCATAATCTTCCATGGAAGCTGAAGCAGCGTTCGAGTAAGGAGGTGATGAAGAAGAGAGTCTATGTCTGCCCCGAGTCGTCCTGTGTCCACCACGATCCTTCTCGAGCTCTGGGCGATCTCACCGGAATAAAGAAGCATTTCTGTAGAAAACACGGCGAGAAGAAGTGGAAATGCGACAAGTGTTCGAAGAAATACGCGGTTCAGTCCGATTGGAAAGCTCATTCCAAAATCTGCGGCACCAGAGAGTATAAGTGCGATTGCGGAACCTTGTTTTCCAGGAGGGATAGCTTCATCACGCACAGAGCTTTCTGCGATGCGTTGGCCGAGGAGAGCGCCAGAGCTCAAACTCGTCCTCAACATCCAACCATGGCGGAGTCTGACCCAAAAGTTCATCCTCCTGTTAACACTTCACCGTCGCCGCCTTCTTCAGCTCCATTGCCGGCTGCTCCTCCACAGTCGACCAGTGGTGTCCCGTCAGCTTTGCCGATTCAGGGCCAAGAGCTAACGGAGAATCCCCCGCCAATTATCGAAGAAGTACCAACCGGAATGGGATTAAACGGGAGCTGTAGTAGCAGTACAAGCCCGAGCAGCCATGGCTGCTCTAGCAGTAGTGTATTCGCAAGCTTATTTGCTTCCTCAAATGCAGCCGTGAACTTACCTACTCAGCAACCCCCGGCCTTCACCGATCTAATCCGAGCCATGGGAAGGTCAGATCACCCAGCTGAGCTCGCCCTTTCATCACCAACTGAACCCATTTCTCTCTGCCTCTCAACGACCCATCACAGGCCATCAATTTTCGTGGCCGATGGCCAGTACCCACCTCCTCCGCAGCCGCCACCCATGTCAGCCACAGCCCTTCTTCAGAAAGCTGCTCAAATGGGAGCTGTAACCACTAATGGATCATTGCTTCGAGGGTTTGGCTTAGTCAGCTCAGCTTCTTCACCTACGCAGCAAGAGAACCTCCAATGGAATCAGAGGCAAGTCGAGCCAGAGTCTGCAGGGCTCGGCCTGGGACTTCCTTGTGATGGAAGATCTGGATTGAAGGAGCTGATGATGGGAAATCATTCCATTTTTGATCCTAAGCAAACTACACTTGATTTTCTAGGTCTTGGAATGGCTGCCGGTGGGAGTCCCAGTGGCAGCCTGTCGGCGTTAATCACGTCCATTGGCGGTGGTCTAGACATTGCAGCTGCTGCCTCCCTCGAATTCTCCGGCAAAGACATGAGTAGAAACTTGTGA 1485 52.05 MATDLDNSSTASGEASVSSSGNQPPPPKSTAKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICSKGFQRDQNLQLHRRGHNLPWKLKQRSSKEVMKKRVYVCPESSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARAQTRPQHPTMAESDPKVHPPVNTSPSPPSSAPLPAAPPQSTSGVPSALPIQGQELTENPPPIIEEVPTGMGLNGSCSSSTSPSSHGCSSSSVFASLFASSNAAVNLPTQQPPAFTDLIRAMGRSDHPAELALSSPTEPISLCLSTTHHRPSIFVADGQYPPPPQPPPMSATALLQKAAQMGAVTTNGSLLRGFGLVSSASSPTQQENLQWNQRQVEPESAGLGLGLPCDGRSGLKELMMGNHSIFDPKQTTLDFLGLGMAAGGSPSGSLSALITSIGGGLDIAAAASLEFSGKDMSRNL 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 611594 613675 + Bpe019496.1 Bpe06g00051 104989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00051 494 Pfam Zinc finger, C2H2 type 61 83 IPR013087 -
Bpe06g00051 494 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Bpe06g00051 494 Gene3D Classic Zinc Finger 61 107 - -
Bpe06g00051 494 SMART c2h2final6 61 83 IPR013087 -
Bpe06g00051 494 SMART c2h2final6 138 158 IPR013087 -
Bpe06g00051 494 SMART c2h2final6 103 133 IPR013087 -
Bpe06g00051 494 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Bpe06g00051 494 MobiDBLite consensus disorder prediction 194 279 - -
Bpe06g00051 494 MobiDBLite consensus disorder prediction 215 234 - -
Bpe06g00051 494 MobiDBLite consensus disorder prediction 1 45 - -
Bpe06g00051 494 Gene3D Classic Zinc Finger 116 196 - -
Bpe06g00051 494 SUPERFAMILY beta-beta-alpha zinc fingers 60 158 IPR036236 -
Bpe06g00051 494 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 7 493 - -
Bpe06g00051 494 MobiDBLite consensus disorder prediction 1 29 - -
Bpe06g00051 494 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 7 493 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe06g00051 Bpe10g00110 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00209 Bpe-Chr4:1434848 Bpe06g00051 Bpe-Chr6:611594 7.71E-133 dispersed
Bpe06g00051 Bpe-Chr6:611594 Bpe06g00780 Bpe-Chr6:18046584 7.63E-116 dispersed
Bpe10g00110 Bpe-Chr10:1913481 Bpe06g00051 Bpe-Chr6:611594 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21530 PF00096 zf-C2H2 0.0085 CL0361 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00051 K25869 - tcc:18610967 681.404