Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00053 ATGGGGACAGGAGAAGATGGTACACCATCTAAAAATTCAAAACCAGTATCTTCGTCTCAGGAAATACCAACAACTCCATATCCTGATTGGTCAAGCTCGATACAGGCTTATTATGGTGCTGGGGCTACACCACCTCCGTTTTTTGCATCGACTGTAGCTTCTCCAACTCCTCACCCCTATTTGTGGGGAAGTCAGCATCCTTTGATTCCACCATATGGGACTCCAGTACCGTATACGGCAATTTATCCTCCTGGGGGGATTTATGCTCATCCTAGTATGGCAATGACTCCTGGCACCGTTCATACAAATACGGAGCTGGAAGGGAAGTCTCCAGAAGGAAAAGACAGGAATTTCGCAAAGAAAGCGATAGGAAATGCAGGCTCATCTGGCGGCAAGGTGGCCTCAGGATCAGGAAACGATGGTGCTTCTCAAAGTGCGGATAGTGGCTCCGAGGGTTTGTCTGATGGTAGTGACGAGAATCCTAATCAACAGGAATTTACGGGAAATAAAAAGGGTAGCTTTGACCAGATGCTTGCTGATGGAGCAAATGCACAAGGTAGTGGAAAACCTGCTACTAATCTAAATATTGGAATGGATTTATGGAATACTTCTGGCTCTGCAAAAGTCAGATCAAACCCATCTCCTACTTCATCTGCTATCAATCCTGCAACAATGATTGGCCGTGAAGGCGTAATGCCAGACCAATGGATTCAAGATGAACGAGAACTAAAACGACAGAAGAGGAAGCAGTCGAATAGGGAGTCAGCCCGGAGGTCAAGATTGCGTAAGCAGGCGGAGTGTGAAGAGCTACAAGCAAGAGTGCAGACTTTGAGCAACGAGAATCGGACTCTTCGGGACGAATTGCAGAGGATTTCTGAAGAATGCGAGAACCTCACATCGGAGAACAGTAACATGAAGGAAGAACTAACTCGGTTGTGTGGACCGGAGGCATTGGCTAACATGGAACAAGGGGGAGGTGAGGGGGAATAG 990 47.17 MGTGEDGTPSKNSKPVSSSQEIPTTPYPDWSSSIQAYYGAGATPPPFFASTVASPTPHPYLWGSQHPLIPPYGTPVPYTAIYPPGGIYAHPSMAMTPGTVHTNTELEGKSPEGKDRNFAKKAIGNAGSSGGKVASGSGNDGASQSADSGSEGLSDGSDENPNQQEFTGNKKGSFDQMLADGANAQGSGKPATNLNIGMDLWNTSGSAKVRSNPSPTSSAINPATMIGREGVMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVQTLSNENRTLRDELQRISEECENLTSENSNMKEELTRLCGPEALANMEQGGGEGE 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 631164 633957 - Bpe019500.1 Bpe06g00053 104991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00053 329 Gene3D - 243 297 - -
Bpe06g00053 329 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 323 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bpe06g00053 329 CDD bZIP_plant_GBF1 245 295 IPR045314 GO:0003700|GO:0006355
Bpe06g00053 329 SMART brlzneu 240 304 IPR004827 GO:0003700|GO:0006355
Bpe06g00053 329 MobiDBLite consensus disorder prediction 1 28 - -
Bpe06g00053 329 Coils Coil 253 308 - -
Bpe06g00053 329 PANTHER G-BOX-BINDING FACTOR 1 1 323 - -
Bpe06g00053 329 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 247 262 IPR004827 GO:0003700|GO:0006355
Bpe06g00053 329 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Bpe06g00053 329 MobiDBLite consensus disorder prediction 299 329 - -
Bpe06g00053 329 MobiDBLite consensus disorder prediction 234 249 - -
Bpe06g00053 329 MobiDBLite consensus disorder prediction 186 223 - -
Bpe06g00053 329 MobiDBLite consensus disorder prediction 98 267 - -
Bpe06g00053 329 MobiDBLite consensus disorder prediction 130 171 - -
Bpe06g00053 329 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 242 305 IPR004827 GO:0003700|GO:0006355
Bpe06g00053 329 Pfam bZIP transcription factor 240 302 IPR004827 GO:0003700|GO:0006355
Bpe06g00053 329 SUPERFAMILY Leucine zipper domain 243 299 IPR046347 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe06g00053 Bpe10g00107 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00053 Bpe-Chr6:631164 Bpe11g00296 Bpe-Chr11:2164892 8.92E-55 dispersed
Bpe10g00107 Bpe-Chr10:1859362 Bpe06g00053 Bpe-Chr6:631164 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21531 PF07777 MFMR 3.10E-32 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00053 K09060 - csv:101217128 490.345