Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00054 ATGAACTTTGGAAACGAACACAAACTGGAGAGTGAGAGAAAAGATCGATTGGCTTCAGAACTGGGTCTGGATCCTCGTACTGTGGCTGTCTGGTTTCAGAACAGACGAGCTCGCTGGAAGAGCAAGAAAATGGAGGAAGAATACTTTTCTCTGAAGAAATCTCAAGAATCTGTCCTCCTTCAGAACTCACAGCTCGAATCTGAAATTATGAAACTGAAAGAGCAACTAATGGAAGCAGAGAAGGAGATCCAACTGCTATCAAACAACAGTCCGAGCTCGTCTTTCTCAATCGACGGCATAGATGAATCAGCATTTGTCGGGCAATTTGGACTCGAAGATTGTTTTTACGCGCAGCATGATAACTATATAATTCCGGGAATGGAATGGGTTAATCTGTATTATTAA 405 42.22 MNFGNEHKLESERKDRLASELGLDPRTVAVWFQNRRARWKSKKMEEEYFSLKKSQESVLLQNSQLESEIMKLKEQLMEAEKEIQLLSNNSPSSSFSIDGIDESAFVGQFGLEDCFYAQHDNYIIPGMEWVNLYY 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 648161 649014 - Bpe019501.1 Bpe06g00054 104992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00054 134 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40 1 133 - -
Bpe06g00054 134 Coils Coil 55 89 - -
Bpe06g00054 134 CDD homeodomain 3 43 IPR001356 GO:0003677
Bpe06g00054 134 Pfam Homeodomain 3 40 IPR001356 GO:0003677
Bpe06g00054 134 SMART HOX_1 2 46 IPR001356 GO:0003677
Bpe06g00054 134 SUPERFAMILY Homeodomain-like 3 43 IPR009057 -
Bpe06g00054 134 ProSitePatterns 'Homeobox' domain signature. 17 40 IPR017970 GO:0000981|GO:0006355
Bpe06g00054 134 Gene3D - 1 49 - -
Bpe06g00054 134 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 133 IPR045224 GO:0003700
Bpe06g00054 134 ProSiteProfiles 'Homeobox' domain profile. 1 42 IPR001356 GO:0003677
Bpe06g00054 134 PRINTS Lambda-repressor HTH signature 13 22 IPR000047 GO:0003677
Bpe06g00054 134 PRINTS Lambda-repressor HTH signature 22 38 IPR000047 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe06g00054 Bpe13g00454 CCT
Bpe06g00054 Bpe10g00106 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00054 Bpe-Chr6:648161 Bpe06g00086 Bpe-Chr6:1208829 7.68E-22 dispersed
Bpe10g00106 Bpe-Chr10:1801236 Bpe06g00054 Bpe-Chr6:648161 2.62E-62 wgd
Bpe13g00454 Bpe-Chr13:12050748 Bpe06g00054 Bpe-Chr6:648161 1.40E-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21532 PF00046 Homeodomain 1.80E-12 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00054 K09338 - mnt:21392390 168.703