Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00056 ATGCCGACGTGGAGAGAGAGGGAGAATAACAAGAGGAGAGAGAGAAGAAGGAGAGCCATTGCTGCTAAGATTTACGCTGGTTTGAGAACTCAGGGAAACTATAAGCTTCCTAAGCACTGCGATAATAACGAGGTTTTGAAAGCTCTCTGTGCTGAAGCTGGTTGGGTTGTCGAAGAAGATGGAACTACATACAGAAAGGGATATAAGCCTCCAATGGCGGAAATTGCAGCAAACATGGTGAACCTGAGTGCTTGTTCATCGCTCCAGCCAAGCCCGCAATCTTCCTCCTTCCCTAGCCCTCTACCATCCTACCCGGCCAGCCCTTCATCTTCTTCATTTCCCAGCCCTACCCGTTTCGATCAGAATCCGTCCACTTATCTTCTGCCATTTCTTCGAAACATAGCTTCCATTTCTGCAAATCTCCCTCCTCTGAGAATATCAAACAGCGCCCCTGTAACTCCACCTCTTTCTTCTCCGACCTCGAGAGGCTCGAAGCGGAAACCAGACTGGGAATCGCTGTCTAACGGATCCTCTTTTTGCCACCCCCTTTTTGCCGTCTCCGCTCCGGCGAGCCCCACGCGGCGGCACCATCTACCTCCGGCGACGATTCCGGAGTGCGACGAGTCCGATGCTTCCACGGTTGACTCCGGCAGGTGGGTCAGTTTTCAGACGGTCGGGCCGTCGAATATTCCTACTTCTCCGACGTTCAATTTGACGAAGCCGTTGATCCAGCAGTGTTCTTTGCACGACGCCGTCGAGGGGCGAGTGCCGATGTGTTCAGACTTCGAGTTTGAGAGTGGAAGAGTGAAGGCATGGGAGGGCGAGAAAATTCACGAGGTCGGCGCCGATGATTTAGAGCTCACCCTCGGAAGTGGCAAGTCCCACGGCGGCTAA 894 53.24 MPTWRERENNKRRERRRRAIAAKIYAGLRTQGNYKLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGYKPPMAEIAANMVNLSACSSLQPSPQSSSFPSPLPSYPASPSSSSFPSPTRFDQNPSTYLLPFLRNIASISANLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESLSNGSSFCHPLFAVSAPASPTRRHHLPPATIPECDESDASTVDSGRWVSFQTVGPSNIPTSPTFNLTKPLIQQCSLHDAVEGRVPMCSDFEFESGRVKAWEGEKIHEVGADDLELTLGSGKSHGG 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 673237 674337 - Bpe019503.1 Bpe06g00056 104994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00056 297 MobiDBLite consensus disorder prediction 146 163 - -
Bpe06g00056 297 MobiDBLite consensus disorder prediction 95 109 - -
Bpe06g00056 297 MobiDBLite consensus disorder prediction 146 173 - -
Bpe06g00056 297 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 1 295 - -
Bpe06g00056 297 MobiDBLite consensus disorder prediction 89 118 - -
Bpe06g00056 297 Pfam BES1/BZR1 plant transcription factor, N-terminal 1 122 IPR008540 -
Bpe06g00056 297 MobiDBLite consensus disorder prediction 191 210 - -
Bpe06g00056 297 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 295 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00874 Bpe-Chr3:28501935 Bpe06g00056 Bpe-Chr6:673237 7.91E-38 dispersed
Bpe04g00207 Bpe-Chr4:1420953 Bpe06g00056 Bpe-Chr6:673237 5.98E-79 dispersed
Bpe06g00056 Bpe-Chr6:673237 Bpe09g00267 Bpe-Chr9:1962330 2.15E-41 dispersed
Bpe10g00104 Bpe-Chr10:1582635 Bpe06g00056 Bpe-Chr6:673237 3.64E-154 wgd
Bpe02g00402 Bpe-Chr2:2617186 Bpe06g00056 Bpe-Chr6:673237 1.45E-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21533 PF05687 BES1_N 4.20E-61 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00056 K14503 - jre:108995355 409.838