Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00095 ATGGAGTTTGACGACCAAGAGGAGCATGACGAAGAGATGGCGAGCTTCGACTCGCTCGGAAACTCCGGGTCGAGGGTGAAAATGGCGAACTTGGAAGCTACGAGTCCGCAGAGTAGGAAGCCGAGGTACAGAGAGTGTTTGAAGAATCACGCCGTCGGCATCGGTGGCCATGCCCTCGATGGCTGCGGTGAGTTTATGCCGGCCGGAGCAGAAGGAACGCTGGATGGGCTCAAATGCGCCGCCTGCAACTGCCACCGGAACTTCCACCGGAAAGAGACTGACGCCGGAATAGCAGTCGGAGACCATTTCCTTCTCCCTCACCACCCCCACCCGCAGTTCTCACCTTACTACCGAACTCCGGCGGGGTACCTCCACGTTGCACATCACCAGAGGCCGCTGGCCCTTCCATCGACATCAGGCGGCGGAGGAAGCCATAGCCGGGAAGATCAGGAGGACATTTCCAACCCAATCAGCGGCCATGGAGGCAGCGGAAGCGGAGCTTTTGGGAAGAAAAGATTCAGAACGAAGTTCAGTCAAGATCAGAAAGAGAGAATGCTGGGTTTAGCAGAAAGACTCGGATGGAGGATTCAGAAACACGACGACGCCATCGTTCAACAGTTCTGCAACGAAACAGGGGTTAAACGACAGGTTCTTAAAGTTTGGATGCATAACAACAAGCACACTCTCGGAAAAAAACCCTAA 702 54.84 MEFDDQEEHDEEMASFDSLGNSGSRVKMANLEATSPQSRKPRYRECLKNHAVGIGGHALDGCGEFMPAGAEGTLDGLKCAACNCHRNFHRKETDAGIAVGDHFLLPHHPHPQFSPYYRTPAGYLHVAHHQRPLALPSTSGGGGSHSREDQEDISNPISGHGGSGSGAFGKKRFRTKFSQDQKERMLGLAERLGWRIQKHDDAIVQQFCNETGVKRQVLKVWMHNNKHTLGKKP 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1408916 1409617 + Bpe019542.1 Bpe06g00095 105033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00095 233 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 42 92 IPR006456 -
Bpe06g00095 233 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 26 232 - -
Bpe06g00095 233 MobiDBLite consensus disorder prediction 1 41 - -
Bpe06g00095 233 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 43 92 IPR006456 -
Bpe06g00095 233 MobiDBLite consensus disorder prediction 17 37 - -
Bpe06g00095 233 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 170 226 IPR006455 -
Bpe06g00095 233 Gene3D - 157 231 - -
Bpe06g00095 233 Pfam ZF-HD protein dimerisation region 42 93 IPR006456 -
Bpe06g00095 233 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 26 232 - -
Bpe06g00095 233 SUPERFAMILY Homeodomain-like 160 231 IPR009057 -
Bpe06g00095 233 MobiDBLite consensus disorder prediction 133 170 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00132 Bpe-Chr2:905065 Bpe06g00095 Bpe-Chr6:1408916 3.03E-83 dispersed
Bpe06g00095 Bpe-Chr6:1408916 Bpe15g00427 Bpe-Chr15:15790946 3.89E-55 dispersed
Bpe06g00095 Bpe-Chr6:1408916 Bpe13g00443 Bpe-Chr13:11967088 7.36E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21536 PF04770 ZF-HD_dimer 3.20E-29 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00095 - - csv:101204784 355.91