Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00097 ATGGGTGATGATTTGTACTGCTCTAGTTCCAATCTTCGGTGTGCGGAGAACACCATGTCATGTTTTGATGAATCTAATAGTAATACTACCGTTGATTTCGAGTTATCCCATTCTTTTTCTCTCAAAATCAGTCATGGTCGCAATCTAAGTCAGAGTTTTTGCTTAAACGGATCGGATTCTTCGATGAGTTTTTCATTAGAGTGCGGAGAGACAATGAGGGCAATGGTGGAGAGGGAAAGTGAGCATTTTCCGAAGGGCGATTACCTCGAGAGATTGCGGAGTGGGGATTTCAGTTTAGTCGTTCGGAAAGAAGCTCTGGATTGGATCTGGAAGGTTCAAGCCTACTATAATTTCAGCGCTCTAAGTGTTTATCTCTCTATGAACTACTTTGATCGGTTCATTTCTGTACATCAGCTACCTATGGGTCAAAGTTGGATGGCGCAGTTGCTAGCTGTAGCTTGTGTATCTCTAGCAGCAAAAATGGAGGAAACTGAAGTGCCTCTGCCTGTAGATTTGCAGATTGGAGAGCCAAAATTTGTTTTTGAAGCTAAGACTATTCAAAGAATGGAACTTCTTGTTCTAAGCACCTTAAAATGGAGAATGCAGGCTGTAACTCCTTTCTCTTTCATTGACTACTTTCTCACCAAGATCAACACAGATCGGAATCCATCCGGACCGTCCATTTCTAGAGCAATACAACTCACGCTCAACACGATCAATGGTTATATAGATTTCTTGGAATTCTTGCCATCGGAAATCGCGGCAGCTGTTGCAACTTCCATATCAATTGAATTGGAAGGACTAGACATTGACAAGGCAACCTCTAGCTTTGAGCATGTAGACTTGGGAAGAGTGGGGAAGTGTATTGAACTGATAGTGAGTCTTTCAATGGCGGGCGGTGGGTCTAGCAATGGAGAAAGAGGGTCGGCTGCATTGGCTTCCTCGGTTCCTCGAAGCCCGGTTAGGGTATTAGAAGCTGCATGTTGGAGCTCTAAAAGTGATGAATCAATGGCTGATTCTTCACATAATTGTCCAAACATCGATGGCATAAGACCAAGATTATCAGAGGTGGATCTTAACGCATGA 1086 43.28 MGDDLYCSSSNLRCAENTMSCFDESNSNTTVDFELSHSFSLKISHGRNLSQSFCLNGSDSSMSFSLECGETMRAMVERESEHFPKGDYLERLRSGDFSLVVRKEALDWIWKVQAYYNFSALSVYLSMNYFDRFISVHQLPMGQSWMAQLLAVACVSLAAKMEETEVPLPVDLQIGEPKFVFEAKTIQRMELLVLSTLKWRMQAVTPFSFIDYFLTKINTDRNPSGPSISRAIQLTLNTINGYIDFLEFLPSEIAAAVATSISIELEGLDIDKATSSFEHVDLGRVGKCIELIVSLSMAGGGSSNGERGSAALASSVPRSPVRVLEAACWSSKSDESMADSSHNCPNIDGIRPRLSEVDLNA 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1430128 1432013 - Bpe019544.1 Bpe06g00097 105035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00097 361 CDD CYCLIN 102 194 IPR013763 -
Bpe06g00097 361 SMART cyclin_7 107 195 IPR013763 -
Bpe06g00097 361 Gene3D - 85 202 - -
Bpe06g00097 361 Gene3D - 73 290 - -
Bpe06g00097 361 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
Bpe06g00097 361 PANTHER CYCLIN-D4-1-LIKE 1 346 - -
Bpe06g00097 361 SUPERFAMILY Cyclin-like 186 297 IPR036915 -
Bpe06g00097 361 Pfam Cyclin, C-terminal domain 204 296 IPR004367 -
Bpe06g00097 361 SUPERFAMILY Cyclin-like 64 201 IPR036915 -
Bpe06g00097 361 PANTHER CYCLINS 1 346 IPR039361 -
Bpe06g00097 361 Pfam Cyclin, N-terminal domain 72 201 IPR006671 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00135 Bpe-Chr2:931022 Bpe06g00097 Bpe-Chr6:1430128 9.23E-89 dispersed
Bpe06g00097 Bpe-Chr6:1430128 Bpe15g00257 Bpe-Chr15:13904491 2.46E-100 dispersed
Bpe10g00051 Bpe-Chr10:730871 Bpe06g00097 Bpe-Chr6:1430128 5.63E-122 wgd
Bpe13g00484 Bpe-Chr13:12274041 Bpe06g00097 Bpe-Chr6:1430128 4.82E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00097 K18810 - qsu:111991591 366.696