Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00118 GCAAAAATGAAGTTGCTTCTTCTTCTCCTTCTGCTCCTCCTTCTTCACCTCCACATTCTGCCGTCTCTCGCCGCTCGGATATCCGAATACCGTGCTCTTCTCTCTCTTAAAAGCTCCATTTCAGAAGACCCCAGCTCCTTTCTCTCCTCTTGGAAGCTCTCTACTAGCCACTGTACTTGGGCTGGTGTTTCCTGCGATAATCGCCGTCATGTCGTCAGTCTTGACCTCTCTGGCGTTAATCTCTCCGGCGTGCTTTCGCCTGATGTTGCTTACCTTGGATTTCTTACGAATCTTTCGCTCGCTGTTAATCAGTTCTCCGGCCCAGTTCCGCCGGAGATGTCTGCTCTCGCTGCACTCCGATACCTTAACCTTTCGAATAACTTTTTCAATGGTACATTCCCTTCTGAACTGGCGGGACTGAAAAACTTGCAGGTTTTGGATTTGTATAACAACAACATGACCGGAGATTTGCCTCTTGCGGTGACGGAGCTGCCGAACCTCAGACATTTGCATCTGGGTGGGAACTTTTTCCTCGGTCGGATTCCGGCAGAGTACGGTCGGTGGGAGTCATTGGAGTATTTAGCGGTCTCCGGTAACGAGCTTGAAGGACCCATTCCCCCGGAGATCGGAAACTTGGGGAAGCTTCGAGAACTCTACATTGGGTATTACAACAACTATGAAGGTCGTTTACCGGCGGAGATCGGAAATTTGTCGTCGTTGGTACGGTTCGACGCTGCCAACTGTGGGTTAACCGGTGAAATACCGCCAGAGCTGGGAAAACTTCTGAATCTCGACACTCTGTTTCTCCAAGTGAATGCGCTATCTGGGTCTTTGACATCTGAACTTGGGATGTTAAAGAGCTTGAAGTCAATGGATTTGTCTAACAATGTCCTCTCTGGCGAGATTCCGGTTTCATTCTCCGATCTGAAGAACTTGACGCTGTTAAATCTGTTTAGAAACCAGCTTCACGGAGCGATCCCGGACTTCATCGGAGACTTGCCGGAGTTAGAAGTGTTGCAGTTGTGGGAAAATAACCTCACCGGTTGGATTCCTCAGGGTCTCGGAAAGAATGGGAAGCTTCAGCTTCTTGATCTTTCTTCTAACAAGCTAACCGGAACTCTTCCTCCGGAAATGTGCTCCGGCAATCGCCTTCAGACTCTGATTACTCTTGGAAATTTCTTGTTCGGCCCGATTCCGGAGTCTCTTGGGAAATGCGAGTCGCTGAGTCGTATTCGAATGGGGGGAAATTTTCTCAATGGATCGATCCCGAATGGTCTCTTTGATTTGCGGAAGCTTACTCAGGTCGAATTGCAAAACAATTATCTCGCCGGAGAGTTTCCGGTAATACTTTCGGTATCGGGGAATCTCGGTCAGATTAGTCTGTCAAACAATCAACTTTCTGGGTCATTGCCACCCACTATTGGAAACTTCTCCGGCGTGCAAAAACTTCTCCTCGACGGAAACAATTTCTCCGGTCCAATACCATCTGAGATCGGAAAGTTACAACAGCTATCAAAGATCGATTTCAGCCGAAACCAGTTCTTCGGTTCGATTACACCAGAAATAAGCAAATGCAAGCTCCTTTCGTTCGTTGATCTCAGTAGAAACGAGCTCTCCGGCGAGATTCCGAACGAGATTACCTCCATGAGGATACTGAATTATCTGAACCTATCTAGAAACCATTTAGTTGGAAACGTTCCTTCTTCCATAGCCTCAATGCAGAGCTTAACTTCTGTAGATTTTTCCTACAACAATCTCTCCGGTTTAGTTCCCGGTTCCGGCCAATTCAGCTACTTTAATGCCACGTCATTTCTCGGCAATCCCAATCTCTGCGGCCCTTACTTAGGACCTTGCAAAAATGGAGTGGCGAATTCCACGGAACAATCTCATACGAAATCCCATCTATCAGCTTCTCTGAAGCTCCTGCTAGTTATTGGATTGCTCGTCTGCTCCATTGCATTCGCCATTGCAGCAATTATAAAAGCTCGATCATTAAAACGAGGGAGTGCAGCTAGAGCATGGAAATTAACAGCCTTTCAACGCTTGGACTTTACAGCGGACGATGTTTTAGATGCCTTGAAAGAAGACAACATCATCGGAAAAGGAGGGGCTGGAATAGTTTACAAAGGGTCTATGCCAAACGGGGATATCATTGCCATCAAACGACTTCCGGCGATGAGCCGTGGTTCTTCGCACGATCACGGATTCAACGCCGAGATTCAAACCCTGGGGAGGATTCGACATCGTCACATCGTTAGATTACTGGGTTTTTGTTCAAATAGCGAGACAAATCTTCTGGTGTATGAGTACATGCCTAATGGAAGCTTGGGGGAAGTTCTTCATGGCAAAAAAGGTGGGCATTTGCAGTGGAACACTAGATATAAAATCGCCATTGAATCCTCCAAAGGTCTCTGCTATCTTCACCATGATTGCTCGCCGTTGATAGTTCATCGAGATGTGAAATCAAATAACATCTTGTTGGACTCCAGTTTCGAAGCTCACGTTGCAGATTTCGGCCTCGCCAAGTTTTTGCAGGACTCGGGTGCTTCCGAGTGCATGTCCGCCATTGCTGGATCTTATGGATACATAGCCCCAGAATATGCTTATACTCTGAAGGTTGACGAGAAGAGCGACGTTTACAGTTTCGGAGTAGTTTTGCTAGAGCTGGTTAGTGGAAGAAAACCAGTCGGAGAATTCGGCGATGGCGTCGACATTGTTCAGTGGGTTAGAAAAATGACAGATTCAAACAAGGAAAGAGTCCTCAACATCATCGACCAGAGACTTTCTTCTGTTCCTCTTCACGAAATAATGCATGTCTTCTACGTCGCCTTGCTCTGCGTGGAAGAACAGGCGATTGAGCGACCCACCATGCGAGAGGTCGTTCAGATCTTAACCGAGCTTCCCAAGCCTCCGACAATGGCGGACTCTTCTCCTGCGTTACCCACGTCTTCGAATTCTCCCCCTCCTCCTGATCTTCTCAGCATTTGA 2988 47.42 AKMKLLLLLLLLLLLHLHILPSLAARISEYRALLSLKSSISEDPSSFLSSWKLSTSHCTWAGVSCDNRRHVVSLDLSGVNLSGVLSPDVAYLGFLTNLSLAVNQFSGPVPPEMSALAALRYLNLSNNFFNGTFPSELAGLKNLQVLDLYNNNMTGDLPLAVTELPNLRHLHLGGNFFLGRIPAEYGRWESLEYLAVSGNELEGPIPPEIGNLGKLRELYIGYYNNYEGRLPAEIGNLSSLVRFDAANCGLTGEIPPELGKLLNLDTLFLQVNALSGSLTSELGMLKSLKSMDLSNNVLSGEIPVSFSDLKNLTLLNLFRNQLHGAIPDFIGDLPELEVLQLWENNLTGWIPQGLGKNGKLQLLDLSSNKLTGTLPPEMCSGNRLQTLITLGNFLFGPIPESLGKCESLSRIRMGGNFLNGSIPNGLFDLRKLTQVELQNNYLAGEFPVILSVSGNLGQISLSNNQLSGSLPPTIGNFSGVQKLLLDGNNFSGPIPSEIGKLQQLSKIDFSRNQFFGSITPEISKCKLLSFVDLSRNELSGEIPNEITSMRILNYLNLSRNHLVGNVPSSIASMQSLTSVDFSYNNLSGLVPGSGQFSYFNATSFLGNPNLCGPYLGPCKNGVANSTEQSHTKSHLSASLKLLLVIGLLVCSIAFAIAAIIKARSLKRGSAARAWKLTAFQRLDFTADDVLDALKEDNIIGKGGAGIVYKGSMPNGDIIAIKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNSETNLLVYEYMPNGSLGEVLHGKKGGHLQWNTRYKIAIESSKGLCYLHHDCSPLIVHRDVKSNNILLDSSFEAHVADFGLAKFLQDSGASECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTDSNKERVLNIIDQRLSSVPLHEIMHVFYVALLCVEEQAIERPTMREVVQILTELPKPPTMADSSPALPTSSNSPPPPDLLSI 995
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 1906214 1909295 + Bpe019568.1 Bpe06g00118 105056
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00118 995 SUPERFAMILY RNI-like 73 394 - -
Bpe06g00118 995 Pfam Leucine rich repeat 119 175 IPR001611 GO:0005515
Bpe06g00118 995 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Bpe06g00118 995 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 981 - -
Bpe06g00118 995 SMART serkin_6 693 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00118 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Bpe06g00118 995 Gene3D Phosphorylase Kinase; domain 1 661 770 - -
Bpe06g00118 995 Gene3D Ribonuclease Inhibitor 242 353 IPR032675 -
Bpe06g00118 995 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 5 981 - -
Bpe06g00118 995 Gene3D Transferase(Phosphotransferase) domain 1 771 976 - -
Bpe06g00118 995 SMART LRR_typ_2 573 596 IPR003591 -
Bpe06g00118 995 SMART LRR_typ_2 285 308 IPR003591 -
Bpe06g00118 995 SMART LRR_typ_2 501 525 IPR003591 -
Bpe06g00118 995 SMART LRR_typ_2 116 139 IPR003591 -
Bpe06g00118 995 SMART LRR_typ_2 358 381 IPR003591 -
Bpe06g00118 995 SMART LRR_typ_2 333 357 IPR003591 -
Bpe06g00118 995 SMART LRR_typ_2 140 164 IPR003591 -
Bpe06g00118 995 SUPERFAMILY L domain-like 302 620 - -
Bpe06g00118 995 ProSiteProfiles Protein kinase domain profile. 693 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00118 995 Pfam Protein tyrosine and serine/threonine kinase 695 964 IPR001245 GO:0004672|GO:0006468
Bpe06g00118 995 MobiDBLite consensus disorder prediction 969 995 - -
Bpe06g00118 995 Gene3D Ribonuclease Inhibitor 354 622 IPR032675 -
Bpe06g00118 995 SUPERFAMILY Protein kinase-like (PK-like) 689 964 IPR011009 -
Bpe06g00118 995 Gene3D Ribonuclease Inhibitor 184 237 IPR032675 -
Bpe06g00118 995 Gene3D Ribonuclease Inhibitor 26 183 IPR032675 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00927 Bpe-Chr3:28950384 Bpe06g00118 Bpe-Chr6:1906214 0 dispersed
Bpe06g00118 Bpe-Chr6:1906214 Bpe10g00028 Bpe-Chr10:401802 0 dispersed
Bpe13g00534 Bpe-Chr13:12615834 Bpe06g00118 Bpe-Chr6:1906214 6.41E-24 dispersed
Bpe04g00251 Bpe-Chr4:1680385 Bpe06g00118 Bpe-Chr6:1906214 0 transposed
Bpe13g00995 Bpe-Chr13:15696103 Bpe06g00118 Bpe-Chr6:1906214 4.75E-157 transposed
Bpe10g00026 Bpe-Chr10:386710 Bpe06g00118 Bpe-Chr6:1906214 0 wgd
Bpe13g00148 Bpe-Chr13:9178996 Bpe06g00118 Bpe-Chr6:1906214 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63374 PF07714 PK_Tyr_Ser-Thr 1.00E-44 CL0016 Bpe PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00118 - - vvi:100855393 1570.83