Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00130 GGTACTCTATCTGTGTCTCCCGTCCGATTATTCGATGGTCGTTTTATTTGCGCTGTTTTCGCAGGTGTTCAATCCGCCACATTCGCTATTGTTAACAATTGCAGCTACACAGTATGGCCCGGAATTTTGTCAAGTGCTGGAACGGAGGAGCTCTCCACCACCGGCTTCGTCCTCTTATCCGGTGGCTCCACCCTCGTCAACGTCCCAACCTCCTGGTCCGGTCGCCTATGGGGTCGGACATATTGCTCTCAAGACTCCGATAGGAACTTCTCCTGCGCCACCGCGGACTGCGGCTCCGGCACTGTCGAATGTAGTGGAGCAGGCGCAGTGCCACCAGCTACCCTCGCCGAGTTTACCTTGAACGGCAGCGGCGGCCTTGATTTTTACGACGTCAGCCTCGTGGACGGGTATAACCTGGGAATTCTTATCACCCCACAAGGCGAAACCATCGGAAATTGTACTTCGACTGGGTGCTTTGCCGATTTAAACAAGGTTTGTCCGCCTGAGCTGCGAGTGACGATGACCGGCATAGACGGCATTGGGCAGAATGTGGCTTGCAAGAGCGCGTGCGAGGCGTTCGGACAGCCGGAATACTGTTGTAGCGGAGAATATTCAAATCCAAATACTTGCAAACCTACGTCATATTCGCAGTTCTTCAAAAATGCATGTCCATTAGCTTACAGCTATGCCTACGACGATGGAAGCAGCACCTTCACTTGCTCTTCGCCTACCTATATCATCACTTTCTGCCCCTCCTCCTCCCCCAGTTTGAAATCATCGAACGGACAATATCCAGTGGCTGTTGACTTGTCCGGCGGGTCTCATTTCACATCACCGCCATTTATTGGTTTTCTCGCCGTTGTTTTGGCATCAAGTTGGAAGTTGGCTCAACGATGA 897 52.29 GTLSVSPVRLFDGRFICAVFAGVQSATFAIVNNCSYTVWPGILSSAGTEELSTTGFVLLSGGSTLVNVPTSWSGRLWGRTYCSQDSDRNFSCATADCGSGTVECSGAGAVPPATLAEFTLNGSGGLDFYDVSLVDGYNLGILITPQGETIGNCTSTGCFADLNKVCPPELRVTMTGIDGIGQNVACKSACEAFGQPEYCCSGEYSNPNTCKPTSYSQFFKNACPLAYSYAYDDGSSTFTCSSPTYIITFCPSSSPSLKSSNGQYPVAVDLSGGSHFTSPPFIGFLAVVLASSWKLAQR 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2250709 2251804 + Bpe019581.1 Bpe06g00130 105068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00130 298 SUPERFAMILY Osmotin, thaumatin-like protein 26 252 IPR037176 -
Bpe06g00130 298 CDD TLP-PA 27 250 - -
Bpe06g00130 298 PANTHER - 21 265 - -
Bpe06g00130 298 PANTHER OS03G0233200 PROTEIN 21 265 IPR001938 -
Bpe06g00130 298 Gene3D Thaumatin 26 251 IPR037176 -
Bpe06g00130 298 Pfam Thaumatin family 32 251 IPR001938 -
Bpe06g00130 298 SMART tha2 28 251 IPR001938 -
Bpe06g00130 298 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Bpe06g00130 298 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Bpe06g00130 298 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Bpe06g00130 298 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Bpe06g00130 298 ProSiteProfiles Thaumatin family profile. 25 251 IPR001938 -
Bpe06g00130 298 PIRSF PR5 3 288 IPR001938 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe06g00130 Bpe15g00474 CCT
Bpe06g00130 Bpe15g00474 ECH
Bpe06g00130 Bpe10g00159 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01271 Bpe-Chr3:31262551 Bpe06g00130 Bpe-Chr6:2250709 2.68E-11 dispersed
Bpe04g00250 Bpe-Chr4:1672685 Bpe06g00130 Bpe-Chr6:2250709 7.27E-111 dispersed
Bpe06g00130 Bpe-Chr6:2250709 Bpe14g01332 Bpe-Chr14:10543774 1.10E-104 dispersed
Bpe11g00766 Bpe-Chr11:5772122 Bpe06g00130 Bpe-Chr6:2250709 1.49E-59 transposed
Bpe10g00159 Bpe-Chr10:3831886 Bpe06g00130 Bpe-Chr6:2250709 7.39E-90 wgd
Bpe05g00142 Bpe-Chr5:3708511 Bpe06g00130 Bpe-Chr6:2250709 1.15E-84 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00130 - - pvy:116121468 392.119