Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00144 ATGCGATGTTTTGTGTACATATTAAACTTGATTGTATTTAATGAATTGAAAGACCATCAAGAGGCTATTGCTAGAGTACGTAGAGCTATTAAGTATATTCGATCTTCACCTGCAAGATCAGGATTAATGCAGACACATGATGAAGAAACCAGAAAGTTTTTCAAGCATTCATCTGTCATCTGTGTGTTGGCACCTCGCTATCCAAGCAGCAAGCTAAGCTATATCAAGCAGAAGATCCTAAGTCGGATATTAAAAATTGGATTAAGATTTCTGTATTATGTTAAATATTTGTCCTTGTTCCATGGTTTTTTCCAGGTTGTTGGGACTCTTTTCACACACCATCAGAAGTGTGTTCTTGTTGATACACAGGCAGATGGTAATAATCGAAAGATAACTGCATTTCTCGGAGGTCTTGATCTGTGTGATGGTCGATACGATACGCCTGAACATAGACTATTTCGTGATCTCGACACCGTATTTCAGGATGATTTTCATAATCCTACATTTGGTACCTATTATGTTGTGTTTTATGATATGATGTTTGTTGGATTGAAGGCTCCGAGGCAGCCATGGCATGACTTGCATTGTCAAATTAATGGGCCTGCTGCATATGATGTTCTTCTAAACTTTGAGCAGCGTTGGAAAAGAGCCACAAAATGGACAGAGATTGGATTACAATTTAAAAGAACCTCACATTGGCATGATGATTCTCTAATAAAAATCGAACGAATCTCTTGGATATTAATTGTATATGCAATGCAAGATGTGTATATTTTTTTCATTTTGCAGATTTTTCGGTCAATTGACTCTGGATCTCTGAAGGGATTCCCTAGAGCAGTTGATATAGCCATGTCCCAGAACCTTGTTTGTTCAAAAGATTTGGTCGTAGACAAGAGCATTCAAACAGCATACATCCAGGCTATACGATCTGCTCAACATTTCATTTATATTGAGAATCAGTACTTCATAGGATCATCATATGCATGGCCCTCTTACAAGTATGCAGCAGGGGCTGATAATCTCATTCCGATGGAGTTGGCACTGAAGATAGCTAGCAAAATTAGAGCTAACGAGAGATTCGCTGTATATGTTGTTGTACCAATGTGGCCTGAAGGAGATCCAACTACTGCTCCTATGCAAGAGATACTTTACTGGCAGGGACAAACAATGCAGATGATGTATGGAGTTGTTGCAGAGGCACTAAAGTCAGCTCAGCTCTCGAATTCGCATCCTCAAGACTACCTCAATTTTTATTGCCTCGGTAATCGAGAAAAAGTTTCTGAGAAAGCTGAGAATGCTGATGACAAATCGGTCTCGAGTGCACAAAAGTATCAGAGATTTATGATATATGTGCATGCCAAGGGAATGATAGTAGACGATGAATACGTCATAATTGGATCCGCTAATATCAACCAAAGATCAATGGCTGGAACAAAAGACACCGAGATAGCCATGGGCGCATATCAGCCTCATCACACATGGGCTAAGAGGAAGGGACGGCCCCACGGCCAGCAGATCTATGGATACAGAGAGTCACTATGGAGTGAGCATCTAGGAAACTTGGGGCCGGAGTTGGACGAACCGGAGAGTTTAAAATGCGTAAGAAGAGTTAACGAGATTGCCGAAGATAACTGGCGGCGATATGCATCGGAAGAATTCGAGAGTTTGCTGGGCCATCTTCTCAAGTATCCTATTCAGGTGGAGGCTGATGGAACAGTCCATCCTCTTCCTGGAAGTGAGACTTTTCCAGACGTTGGAGGTAAAGTGCTTGGCGGTCATTCTACTACTCTTCCTGATGCCTTGACAACATAG 1812 41.28 MRCFVYILNLIVFNELKDHQEAIARVRRAIKYIRSSPARSGLMQTHDEETRKFFKHSSVICVLAPRYPSSKLSYIKQKILSRILKIGLRFLYYVKYLSLFHGFFQVVGTLFTHHQKCVLVDTQADGNNRKITAFLGGLDLCDGRYDTPEHRLFRDLDTVFQDDFHNPTFGTYYVVFYDMMFVGLKAPRQPWHDLHCQINGPAAYDVLLNFEQRWKRATKWTEIGLQFKRTSHWHDDSLIKIERISWILIVYAMQDVYIFFILQIFRSIDSGSLKGFPRAVDIAMSQNLVCSKDLVVDKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPSYKYAAGADNLIPMELALKIASKIRANERFAVYVVVPMWPEGDPTTAPMQEILYWQGQTMQMMYGVVAEALKSAQLSNSHPQDYLNFYCLGNREKVSEKAENADDKSVSSAQKYQRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGTKDTEIAMGAYQPHHTWAKRKGRPHGQQIYGYRESLWSEHLGNLGPELDEPESLKCVRRVNEIAEDNWRRYASEEFESLLGHLLKYPIQVEADGTVHPLPGSETFPDVGGKVLGGHSTTLPDALTT 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2560865 2572233 - Bpe019598.1 Bpe06g00144 105082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00144 603 PANTHER PHOSPHOLIPASE D 40 602 IPR015679 -
Bpe06g00144 603 Pfam PLD-like domain 305 484 IPR025202 -
Bpe06g00144 603 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 109 144 IPR001736 GO:0003824
Bpe06g00144 603 SUPERFAMILY Phospholipase D/nuclease 60 224 - -
Bpe06g00144 603 Pfam Phospholipase D C terminal 525 592 IPR024632 -
Bpe06g00144 603 PANTHER PHOSPHOLIPASE D 40 602 - -
Bpe06g00144 603 SMART pld_4 109 144 IPR001736 GO:0003824
Bpe06g00144 603 SMART pld_4 447 474 IPR001736 GO:0003824
Bpe06g00144 603 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 447 474 IPR001736 GO:0003824
Bpe06g00144 603 Gene3D Endonuclease Chain A 49 238 - -
Bpe06g00144 603 Gene3D Endonuclease Chain A 273 495 - -
Bpe06g00144 603 Pfam Phospholipase D Active site motif 110 144 IPR001736 GO:0003824
Bpe06g00144 603 SUPERFAMILY Phospholipase D/nuclease 297 532 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00144 Bpe-Chr6:2560865 Bpe07g00133 Bpe-Chr7:940188 0 dispersed
Bpe11g01394 Bpe-Chr11:10387160 Bpe06g00144 Bpe-Chr6:2560865 2.77E-14 transposed
Bpe05g00166 Bpe-Chr5:5121384 Bpe06g00144 Bpe-Chr6:2560865 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00144 K01115 - csin:114277366 822.772