Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00178 ATGGAGACTCTCCATTACCCAATCTCCTTGTCCAAATCCAAGTCGCTGTTACATTGTATACAAAACAGACGAATCAAGTCGCTGAGAGGTGTATCTCTTTGCTCTCTACGGTTTTCTACAAGGGGTATCGAGCCCTTCCCAGCTTTTCCTTCTACTGCTTCAAATTTTAGTAATATACGTTTTGGGCGTTTTTATTGCGTCTGCGAGTCCGCTGATCGTCACCATGATGACCATCACCACCATCACCAGCACTGCCACCACAACCATCACCATTGCAATGATGGTACGGAGCTGACAGGACCTCAAAAGGCGTTGATTAGCTTCGCCAAAGCTACTAAGTGGATAGACTTGGCCAATTATCTGAGAGAGCACCTACAACTGTGTTGTGCTTCCACTGCTTTGTTTGTTGCTGCTGCCGCTTGTCCTTACTTAGTGCCCAAGCACGCAGTGAAGCCTCTGCAGAATGCGTTCATAGTCTCAGCTTTCCCTCTAGTTGGGGTGTCTGCATCTCTTGATGCTCTTACTGATATCTGTGGTGGGAAAGTAAACATTCATGTTCTGATGGCACTTGCTGCCTTTGCATCAATATTTATGGGGAACTCTATAGAAGGAGGACTACTTCTTGCCATGTTTAATCTAGCTCATATTGCTGAAGAGTATTTCACCAGCCGATCAATGGTTGATGTTAAAGAGTTGAAAGAAAATTATCCTGAATATGCGCTAGTCCTGGACATTAATGATGACCAGCTTCCTAATACTTCAGAGCTGGCCTATAAAAGGGTGCAAGTGCATGATGTAGAAGTTGGCTCATATATCTTGATTCTTGCTGGGGAGTCTGTGCCTGTAGATTGCGAAGTTTACCAAGGTAGTGCAACAATTACCGTTGAGCACTTAACAGGAGAAGTCAAACCTCTAGAGAAAAATGTTGGAGATCGGGTACCCGGTGGTGCAAGAAATTTGGATGGAAGAATAGTAGTGAAGGTGATAAAAACTTGGAAAGAATCTACTCTGAACAAGATAGTGCAGCTAACTGAAGAAGCACAGATGAATAAGCCAAAGCTTCAAAGGTGGCTCGATGAATTTGGTGAACAGTACAGCAAGGCTGTTGTTGTTTTGTCTGTTGCAATTGCCATCATTGGGCCATTATTATTCAAGTGGCCCTTTATTTGTACACCAGCTTGCAGAGGATCAATCTATAGAGCACTGGGCCTTATGGTGGCAGCATCACCATGTGCCCTGGCTGTTGCTCCATTGGCATATGCCACTGCAATTAGTTCCTGTGCCAGGAAGGGAATACTACTTAAAGGTGGGCATGTGCTAGATGCTTTGGCTTCTTGCCAGACAATCGCATTTGATAAAACTGGGACACTGACTACTGGCGGGCTTGTGTTTAAAGCAATTGAACCAATCTATGGACATAGGGTCATACAAAACAAATCAGAGTTTTCTTCTTGCTGCATTCCTAGCTGTGAAAAGGAAGCGCTTGCTGTGGCTGCAGCAATGGAGAAGGGTACTACTCATCCAATTGGAAGAGCCGTGGTTGACCATAGTGTGGGAAAAGATCTTCCTCCAATATCTGTTGAAAGTTTTGAGTATTTTCCGGGTAAAGGTCTGGTAGCAACTCTGCATGGCATCAAGTCAGGAACTGGAATGGGAAAACTGTTGACAGCATCCCTTGGTTCTGTTGATTTTATTACTTCACTTTGTAAATCTAAAACAGAGTCGAGAAAGGTTCAGGAAGCTGTGAATGCGTCGTCTTATGGAAGAGAATTTGTTTGTGCTGCTCTTTTAGTGGATGAAAAGATAACACTGATTCACCTTGAAGATCGACCTCGACCTGGAGTATTAGATGTGATAGTTGACTTGCAAGATCATGCAAAACTCCGCGTAATGATGCTAACAGGAGATCACGAGTCAAGTGCACGGAGAGTTGCCAATGCAGTGGGCATCAAGGAAGTGTATTGTGGTCTGAAACCTGAAGATAAGCTTAGCTATGTGAAGGATATCTCAAGGGAGACAGGTGGAGGTTTGATAATGGTTGGCGAAGGCATTAACGATGCACCAGCTCTTGCTGCAGCCTCAGTTGGAATAGTGCTTGCTCAACGTGCTAGTGCAACTGCCGTAGCGGTTGCAGATGTTCTTCTACTGCGAGACAACATCCTTGGTGTGCCATTTTCCATTGCCAAGTCACGCCAAACAACTTCCTTGGTTAAACAGAACGTCGCCCTTGCATTAACATCTATTTTTTTGGCTTCCCTTCCATCCGTGCTGGGGTTTGTGCCCTTATGGTTAACGGTTCTTTTACATGAAGGTGGTACGCTTATGGTTTGCCTTAACTCAATACGTGCTCTTAATAACCCAACATGGTCATGGAGGCAAGACTTGCTACATCTTTTTAATGAATTCAGTTCCAAAATTGCAGCATTGATTCCTAAACCGAGTTCTAGCAACACTGAAGCTGCCCATTGGTAA 2472 44.34 METLHYPISLSKSKSLLHCIQNRRIKSLRGVSLCSLRFSTRGIEPFPAFPSTASNFSNIRFGRFYCVCESADRHHDDHHHHHQHCHHNHHHCNDGTELTGPQKALISFAKATKWIDLANYLREHLQLCCASTALFVAAAACPYLVPKHAVKPLQNAFIVSAFPLVGVSASLDALTDICGGKVNIHVLMALAAFASIFMGNSIEGGLLLAMFNLAHIAEEYFTSRSMVDVKELKENYPEYALVLDINDDQLPNTSELAYKRVQVHDVEVGSYILILAGESVPVDCEVYQGSATITVEHLTGEVKPLEKNVGDRVPGGARNLDGRIVVKVIKTWKESTLNKIVQLTEEAQMNKPKLQRWLDEFGEQYSKAVVVLSVAIAIIGPLLFKWPFICTPACRGSIYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGHVLDALASCQTIAFDKTGTLTTGGLVFKAIEPIYGHRVIQNKSEFSSCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSVGKDLPPISVESFEYFPGKGLVATLHGIKSGTGMGKLLTASLGSVDFITSLCKSKTESRKVQEAVNASSYGREFVCAALLVDEKITLIHLEDRPRPGVLDVIVDLQDHAKLRVMMLTGDHESSARRVANAVGIKEVYCGLKPEDKLSYVKDISRETGGGLIMVGEGINDAPALAAASVGIVLAQRASATAVAVADVLLLRDNILGVPFSIAKSRQTTSLVKQNVALALTSIFLASLPSVLGFVPLWLTVLLHEGGTLMVCLNSIRALNNPTWSWRQDLLHLFNEFSSKIAALIPKPSSSNTEAAHW 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4526606 4536373 + Bpe019639.1 Bpe06g00178 105116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00178 823 Gene3D - 461 611 IPR023299 GO:0000166
Bpe06g00178 823 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 258 471 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe06g00178 823 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 585 760 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe06g00178 823 Pfam haloacid dehalogenase-like hydrolase 447 693 - -
Bpe06g00178 823 Gene3D - 222 348 - -
Bpe06g00178 823 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 50 818 - -
Bpe06g00178 823 SFLD Haloacid Dehalogenase 432 733 - -
Bpe06g00178 823 SUPERFAMILY Calcium ATPase, transduction domain A 259 343 IPR008250 -
Bpe06g00178 823 PRINTS P-type cation-transporting ATPase superfamily signature 680 699 - -
Bpe06g00178 823 PRINTS P-type cation-transporting ATPase superfamily signature 603 614 - -
Bpe06g00178 823 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Bpe06g00178 823 PRINTS P-type cation-transporting ATPase superfamily signature 626 636 - -
Bpe06g00178 823 PRINTS P-type cation-transporting ATPase superfamily signature 294 308 - -
Bpe06g00178 823 PRINTS P-type cation-transporting ATPase superfamily signature 704 716 - -
Bpe06g00178 823 SFLD p-type atpase 432 733 IPR044492 -
Bpe06g00178 823 CDD P-type_ATPase_HM 127 782 - -
Bpe06g00178 823 Gene3D - 443 731 IPR023214 -
Bpe06g00178 823 SUPERFAMILY HAD-like 448 780 IPR036412 -
Bpe06g00178 823 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Bpe06g00178 823 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 184 782 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bpe06g00178 823 SUPERFAMILY Calcium ATPase, transmembrane domain M 186 747 IPR023298 -
Bpe06g00178 823 Pfam E1-E2 ATPase 258 430 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00178 Bpe-Chr6:4526606 Bpe08g01488 Bpe-Chr8:15588049 4.21E-48 dispersed
Bpe06g00178 Bpe-Chr6:4526606 Bpe05g00417 Bpe-Chr5:18554382 3.28E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00178 K01534 - qsu:112030040 1178.7