Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00202 ATGTCCACTGTAATTATCCATTTCTCCCTCTTTCTATTCTCTATTTGGACCTTCTTTCCCGTCCAGCTTTTCATCATTGATGTCGTCCATGGCGTCTCTCCGTCGACCAACGCTCCTCCTCATTCGGATGCAGTTTCTCTGCTGTCCTTCAAATCCAAAGCCGATTTGGGTAACAAGTTAGTCTACGACCTTAAATCACGCTTCGATTACTGTCAATGGTCGGGGGTTAAATGTTTACAGGGTCGAGTTATCAGGTTTGTCCTTCAAGATTATGGTCTCCGGGGCTTTATCGCAGCCAATACCTTGAGTAGTCTCGACCAGCTACGAGTGCTCAGCCTCCACAATAACTCGCTCGTAGGTCCCATTCCGGACCTTTCCGGGCTGGTAAATCTGAGATCTCTCTTCATTAGTCGCAACTTCTTCACCGGAGCTTTTCCGCCGTCGATTACCACTCTTCACCGGCTGCAGATTCTCGATATCTCATATAATAACTTTAGTGGCTCACTCCCGGCAACTTTGCTCAGTTTGGAGCGGCTTATTTCATTGCGGCTGGAATGGAACTTCTTCAACGGAAGCGTTCCCTCGCTGAATCAATCCTTCCTCGAAAGCTTCAATGTTTCGGGAAACAACTTGAGTGGACAAATTCCGGTGACACCCACTCTATCGCGTTTTGGAGCTTCTGCGTTTTCAGGAAACCCTGCTCTCTGCGGCGAAATCATAAATAAAGAATGCTACGCGCACTCGCCATTTTTCAAAGCGCCGAATTCGACTCCCCCATCTGAACCTCCCATCCAAATCGCAGAATCTGAAAGCGCGATTCAATCTCCAACACATGAGAAGAGGCGCAAGAATACAGTCCTCATCGTTGGGATTTCGATTGGGGTTTTTACTGTCATAGTCGCCGTTCTCCTATGCCTATTAGTAGCACTGGGAGGATGTAAAACTCAAAATACTTCCAAGCCGGTTACAGCGTCATTTCATGAGGCAACAACAGCCCCAGACGTGGAAATCCAAGTTGCGGACATCGGATTGCAATCAAAGGCGACAAAAGAGGAACGAGTTCCAAGAGCCCAGAAAAATGGAATCCTGATATTTTGCGGGCGTGAGGAACATCTATATACGTTAGAACAGTTGATGAGGGCGTCGGCAGAGTTTCTGGGAAGGGGTTCCATTGGAACTACGTACAAGGCTGCGATAGGTAACCAGTTAATTGTGACTGTGAAGCGGCTTGACGCGGCTAAAACCGCCACTCCAAGCGGTGAAATGTTTGAAAAACACATGAGCACAGTCGGTGGGCTTTGCCACCCCAATTTGGTTCCAGTTCGTGCTTATTTCCAGGCTAAGGGAGAGAGGCTCGTCATCTACGATTATCAACCAAATGGAAGTCTGTTTAGCCTCATTCACGGTTCTAAATCAACGAGGTCAAAACCTCTGCATTGGACGTCATGTTTAAAGATAGCAGACGATGTAGCCCAGGGCATTGCTTACATCCATCAAGCAACAAGCCTTGTGCACGGAAACTTAAAATCCTCAAATGTTCTGCTTGGAGCTGACTTTGAGGCACGTTTAACAGACTATAGCCTTAATACGTTGGTAGAATCTTCTCATCGTCAGGATGTTAATTCGATGCCCCCTGAAGCCATCCTTTGCCATAACTCCATGCAGAAAGGCGATGTTTATGCCTATGGTGTCCTTTTGCTGGAGCTTTTGACAGGCAAACAACCTAGGCAACACCCATATCTTGAGCCCAGGGAGGTGCCCGATTGGGTCCGAACAATGAGGGAAGAAGAGGACGGTGGGGAAAGGCACAAACTTTCAATGCTTACAGAGGTCGCGACTATTGCTAGTTTCACATCTCCAGATGAACGGCCAGAAATGTGGCAGGTTTTGCAAATGATCCAAGAAATCAAGGACAGTCTTACGACAGAGGATTGA 1935 47.39 MSTVIIHFSLFLFSIWTFFPVQLFIIDVVHGVSPSTNAPPHSDAVSLLSFKSKADLGNKLVYDLKSRFDYCQWSGVKCLQGRVIRFVLQDYGLRGFIAANTLSSLDQLRVLSLHNNSLVGPIPDLSGLVNLRSLFISRNFFTGAFPPSITTLHRLQILDISYNNFSGSLPATLLSLERLISLRLEWNFFNGSVPSLNQSFLESFNVSGNNLSGQIPVTPTLSRFGASAFSGNPALCGEIINKECYAHSPFFKAPNSTPPSEPPIQIAESESAIQSPTHEKRRKNTVLIVGISIGVFTVIVAVLLCLLVALGGCKTQNTSKPVTASFHEATTAPDVEIQVADIGLQSKATKEERVPRAQKNGILIFCGREEHLYTLEQLMRASAEFLGRGSIGTTYKAAIGNQLIVTVKRLDAAKTATPSGEMFEKHMSTVGGLCHPNLVPVRAYFQAKGERLVIYDYQPNGSLFSLIHGSKSTRSKPLHWTSCLKIADDVAQGIAYIHQATSLVHGNLKSSNVLLGADFEARLTDYSLNTLVESSHRQDVNSMPPEAILCHNSMQKGDVYAYGVLLLELLTGKQPRQHPYLEPREVPDWVRTMREEEDGGERHKLSMLTEVATIASFTSPDERPEMWQVLQMIQEIKDSLTTED 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7514038 7516504 + Bpe019673.1 Bpe06g00202 105140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00202 644 SUPERFAMILY Protein kinase-like (PK-like) 384 638 IPR011009 -
Bpe06g00202 644 Gene3D Transferase(Phosphotransferase) domain 1 459 644 - -
Bpe06g00202 644 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 644 - -
Bpe06g00202 644 Pfam Leucine rich repeat 130 187 IPR001611 GO:0005515
Bpe06g00202 644 Gene3D Ribonuclease Inhibitor 41 198 IPR032675 -
Bpe06g00202 644 SUPERFAMILY L domain-like 47 237 - -
Bpe06g00202 644 Gene3D Ribonuclease Inhibitor 199 247 IPR032675 -
Bpe06g00202 644 Gene3D Phosphorylase Kinase; domain 1 345 457 - -
Bpe06g00202 644 ProSiteProfiles Protein kinase domain profile. 380 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00202 644 Pfam Protein tyrosine and serine/threonine kinase 384 631 IPR001245 GO:0004672|GO:0006468
Bpe06g00202 644 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 13 644 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00202 Bpe-Chr6:7514038 Bpe11g01621 Bpe-Chr11:12354878 4.08E-151 dispersed
Bpe06g00202 Bpe-Chr6:7514038 Bpe09g00065 Bpe-Chr9:451682 1.07E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63380 PF00069 Pkinase 1.50E-26 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00202 - - bhj:120074099 762.296