Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00236 ATGATTTTCTCCTTTTTCATTCGTTTTTTCTTGGCTCAGCTCCATTTCAGGCCTACCATGTTTCTTCCGCTTGTAATTACAATTTTTATAGTCTCCGCAACTACCGTTGAATGCGCAAATTCAACGATCTGCAATAGCGGAAAATCAGCAAAACCTGTTCCCTATCCGTTTGGATTCGCACAATCGAACTTAATCCGATTAAATTGCACGAATGGAGATATTATGATCGGGGAATTTGTCGTGCGGAGCTTTTCTGCAGATAGTATCCTCGTAAATGTTCCTGCACTATGCAACCGTTCAACCCAGTCAGTTTCATCACTTTTTGGGAAGAACTTTTGGCCAACAAATCGCAACAATCTTCTTCTCCAGGGTTGCAATTCCCCTGGAAGTTGCCCGTTAGCTACAACTCTCTTACCCGACCAAATTCTGTCGACCAACTGCGATGCGAAGAACCATAATTTGACTTGCTTCTTTCAGAATATTACAGGAAGAGGTTTCCTTTCCTCGGAATGGAACCAGAATCAGTGCCAGTTGCTCTACTCATCAATTATCATCAATTCAGAGTTGAACTCAACAGTTTCACTCGCCTTTCAGGCCATTGAATTACAGTGGTGGCTCGAAGGAACCTGCAAATGCTCAAATAACGCAATTCTCTCTGACATTTCACTTCCAACTGGGAATTTCGGGTGCCGGTGCAATTGCCGAGAAGGGTATGAAGGAGACGGCTATGCCGACGGCAAGGGTTGCCGGAGGAGAGATATAGAGAGGTATTCCTTTTACTTCAAAGTAAAATTCAAAGCTATGCCTACTAACAACATACACATATTCTTAGGTATAATGGCTGGTGCTCTTCTAGTGGCTGGTCTTGCCCTCATTTGTTATTTGATACGCCGGCGGGTTTCTTGTATGAAAAATCAAATGAGTGCAAAGCGACTTGTGTCTGAAGCAGCTCGGAACTCCACCGTACCCATTTACTCCTTCAAGGAAATAGAACGAGCCACTGATGGCTTCTCTGAGAAACTAAGGCTCGGAACTGGAGCCTTTGGCACTGTTTATGCTGGAAAAATTTTTAATGACCACTGGGTTGCCATAAAGAGAATCAAATACAGAGACCATAATAGTATTGACCAAGTCATGAATGAGATTCGACTTCTTTCATCCGTTAGCCACCCCAATCTAGTCCGCCTCTTAGGCTGCTCAATTGAGGAAGGCCAACAGATCCTTGTGTATGAGTTTATGCCTAATGGAACTTTATCTCATCACCTTCAAAGAGAGAAAGGAAGTGTGCTTCCATGGACTACTCGCCTCACCATTGCTGCCGAAACTGCTCGTGCAATAGCGTATCTTCATTCTGCCATGCACCCTCCGATTTATCATAGAGACATTAAATCCAGCAATATTCTTTTGGACTATAACTTCAAATCAAAGGTTGCTGATTTTGGTCTTTCTAGACTTGGCATTACTGAATCATCACACATCTCTACAGCCCCTCAAGGGACTCCAGGCTATCTTGATCCGCAGTACCATCAGAATTTTCATCTTTCGGATAAAAGTGATGTTTACAGTTTTGGAGTTGTTCTTTTAGAGATCATTACTGCCATGAAAGTGGTTGATTTTACTCGGCCTCAAGGCGATGTGACATTAGCTGCACTTGCCATCGATCGGATTGGCCGAGGTTGTGTGGATGAAATAATAGACCCATTCCTCGAGCCGAACAGAGATGCCTGGACACTTTATTCTGTCCACAAGGTGGCTGAACTTGCATTTCGATGTTTGGCTTTCCACAGTGAAACAAGGCCGACTATGATGGAAGTGGCAGAGGAGCTTGAAACGATCAGGCACAGTGGGTGGGCAACACTGGAAGAAACTATATGCGTAGGATCGTCCCTAGGATCCACAAGTTCAACGCCACATAATGGAAGTGAAAAATCAATGAGTGGATCGATGGTTAAGAGGGCAGGATTAGGGGGTCAGATCTTGATAGTCCCACGTCAAAACTACAATGGCGATTTCTCTCGGGCTTCGATGGAAGAGGTTACAGATAGCTCACCTGTTTCTGTACAAGATCCTTGGTTCAGTGAGCAAAGCTCACCCTCAACGAATAGTTTGTTGGGTAATGTGATTCATTGA 2130 43.99 MIFSFFIRFFLAQLHFRPTMFLPLVITIFIVSATTVECANSTICNSGKSAKPVPYPFGFAQSNLIRLNCTNGDIMIGEFVVRSFSADSILVNVPALCNRSTQSVSSLFGKNFWPTNRNNLLLQGCNSPGSCPLATTLLPDQILSTNCDAKNHNLTCFFQNITGRGFLSSEWNQNQCQLLYSSIIINSELNSTVSLAFQAIELQWWLEGTCKCSNNAILSDISLPTGNFGCRCNCREGYEGDGYADGKGCRRRDIERYSFYFKVKFKAMPTNNIHIFLGIMAGALLVAGLALICYLIRRRVSCMKNQMSAKRLVSEAARNSTVPIYSFKEIERATDGFSEKLRLGTGAFGTVYAGKIFNDHWVAIKRIKYRDHNSIDQVMNEIRLLSSVSHPNLVRLLGCSIEEGQQILVYEFMPNGTLSHHLQREKGSVLPWTTRLTIAAETARAIAYLHSAMHPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGITESSHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLLEIITAMKVVDFTRPQGDVTLAALAIDRIGRGCVDEIIDPFLEPNRDAWTLYSVHKVAELAFRCLAFHSETRPTMMEVAEELETIRHSGWATLEETICVGSSLGSTSSTPHNGSEKSMSGSMVKRAGLGGQILIVPRQNYNGDFSRASMEEVTDSSPVSVQDPWFSEQSSPSTNSLLGNVIH 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12559983 12563642 + Bpe019722.1 Bpe06g00236 105174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00236 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Bpe06g00236 709 SMART serkin_6 337 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00236 709 ProSiteProfiles Protein kinase domain profile. 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00236 709 Gene3D Transferase(Phosphotransferase) domain 1 413 623 - -
Bpe06g00236 709 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 35 648 IPR045274 GO:0007166
Bpe06g00236 709 Pfam Protein kinase domain 339 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00236 709 MobiDBLite consensus disorder prediction 629 646 - -
Bpe06g00236 709 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Bpe06g00236 709 Gene3D Phosphorylase Kinase; domain 1 298 412 - -
Bpe06g00236 709 MobiDBLite consensus disorder prediction 679 709 - -
Bpe06g00236 709 MobiDBLite consensus disorder prediction 629 648 - -
Bpe06g00236 709 SUPERFAMILY Protein kinase-like (PK-like) 316 611 IPR011009 -
Bpe06g00236 709 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 35 648 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01680 Bpe-Chr2:19410197 Bpe06g00236 Bpe-Chr6:12559983 0 dispersed
Bpe05g01058 Bpe-Chr5:23088544 Bpe06g00236 Bpe-Chr6:12559983 1.12E-47 dispersed
Bpe06g00236 Bpe-Chr6:12559983 Bpe11g01222 Bpe-Chr11:9138134 1.30E-84 dispersed
Bpe11g00405 Bpe-Chr11:3093826 Bpe06g00236 Bpe-Chr6:12559983 5.26E-67 dispersed
Bpe06g00236 Bpe-Chr6:12559983 Bpe06g00237 Bpe-Chr6:12659778 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63382 PF07714 PK_Tyr_Ser-Thr 6.90E-43 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00236 - - pmum:103340007 806.594