Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00237 ATGTTTCTTCCGCTTGTAATTACAATTTTTATAGTCTCCGCAACTACCGTTGAATGCGCAAATTCAACGATCTGCAATAGCGGAAAATCAGCAAAACCTGTTCCCTATCCGTTTGGATTCGCACAATCGAACTTAATCCGATTAAATTGCACGAATGGAGATATTATGATCGGGGAATTTGTCGTGCGGAGCTTTTCTGCAGATAGTATCCTCGTAAATGTTCCTGCACTATGCAACCGTTCAACCCAGTCAGTTTCATCACTTTTTGGGAAGAACTTTTGGCCAACAAATCGCAACAATCTTCTTCTCCAGGGTTGCAATTCCCCTGGAAGTTGCCCGTTAGCTACAACTCTCTTACCCGACCAAATTCTGTCGACCAACTGCGATGCGAAGAACCATAATTTGACCTGCTTCTTTCAGAATATGACAGGAAGAGGTTTCCTTTCCTCGGAATGGAACCAGAATCAGTGCCAGTTGCTCTACTCATCAATTATCATCAATTCAGAGTTGAACTCAACAGTTTCACTCGCCTTTCAGGCCATTGAATTACAGTGGTGGCTCGAAGGAACCTGCAAATGCTCAAATAACGCAATTCTCTCTGACATTTCACTTCCAACTGGGAATTTCGGGTGCCGGTGCAATTGCCGAGAAGGGTATGAAGGAGACGGCTATGCCGACGGCAAGGGTTGCCGGAGGAGAGAGAGGTATTACTTTTACTTCAAAGTAAAATTCAAAGCTATGCCTACTAACAACATACACATATTCTTAGGTATAATGGCTGGTGCTCTTCTAGTGGCTGGTCTTGCCCTCATTTGTTATTTGATACGCCGGCGGGTTTCTTGTATGAAAAATCAAATGAGTGCAAAGCGACTTGTGTCTGAAGCAGCTCGGAACTCCACCGTACCCATTTACTCCTTCAAGGAAATAGAACGAGCCACTGATGGCTTCTCTGAGAAACTAAGGCTCGGAACTGGAGCCTTTGGCACTGTTTATGCTGGAAAAATTTTTAATGACCACTGGGTTGCCATAAAGAGAATCAAATACAGAGACCATAATAGTATTGACCAAGTCATGAATGAGATTCGACTTCTTTCATCCGTTAGCCACCCCAATCTAGTCCGCCTCTTAGGCTGCTCAATTGAGGAAGGCCAACAGATCCTTGTGTATGAGTTTATGCCTAATGGAACTTTATCTCATCACCTTCAAAGAGAGAAAGGAAGTGTGCTTCCATGGACTACTCGCCTCACCATTGCTGCCGAAACTGCTCGTGCAATAGCGTATCTTCATTCTGCCATGCACCCTCCGATTTATCATAGAGACATTAAATCCAGCAATATTCTTTTGGACTATAACTTCAAATCAAAGGTTGCTGATTTTGGTCTTTCTAGACTTGGCATTACTGAATCATCACACATCTCTACAGCCCCTCAAGGGACTCCAGGCTATCTTGATCCGCAGTACCATCAGAATTTTCATCTTTCGGATAAAAGTGATGTTTACAGTTTTGGAGTTGTTCTTTTAGAGATCATTACTGCCATGAAAGTGGTTGATTTTACTCGGCCTCAAGGCGATGTGACATTAGCTGCACTTGCCATCGATCGGATTGGCCGAGGTTGTGTGGATGAAATAATAGACCCATTCCTCGAGCCGAACAGAGATGCCTGGACACTTTATTCTGTCCACAAGGTGGCTGAACTTGCATTTCGATGTTTGGCTTTCCACAGTGAAACAAGGCCGACTATGATGGAAGTGGCAGAGGAGCTTGAAACGATCAGGCACAGTGGGTGGGCAACACTGGAAGAAACTATATGCGTAGGATCGTCCCTAGGATCCACAAGTTCAACGCCACATAATGGAAGTGAAAAATCAATGAGTGGATCGATGGTTAAGAGGGCAGGATTAGGGGGTCAGATCTTGATAGTCCCACGTCAAAACTACAATGGCGATTTCTCTCGGGCTTCGATGGAAGAGGTTACAGATAGCTCACCTGTTTCTGTACAAGATCCTTGGTTCAGTGAGCAAAGCTCACCCTCAACGAATAGTTTGTTGGGTAATGTGATTCATTGA 2067 44.22 MFLPLVITIFIVSATTVECANSTICNSGKSAKPVPYPFGFAQSNLIRLNCTNGDIMIGEFVVRSFSADSILVNVPALCNRSTQSVSSLFGKNFWPTNRNNLLLQGCNSPGSCPLATTLLPDQILSTNCDAKNHNLTCFFQNMTGRGFLSSEWNQNQCQLLYSSIIINSELNSTVSLAFQAIELQWWLEGTCKCSNNAILSDISLPTGNFGCRCNCREGYEGDGYADGKGCRRRERYYFYFKVKFKAMPTNNIHIFLGIMAGALLVAGLALICYLIRRRVSCMKNQMSAKRLVSEAARNSTVPIYSFKEIERATDGFSEKLRLGTGAFGTVYAGKIFNDHWVAIKRIKYRDHNSIDQVMNEIRLLSSVSHPNLVRLLGCSIEEGQQILVYEFMPNGTLSHHLQREKGSVLPWTTRLTIAAETARAIAYLHSAMHPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGITESSHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLLEIITAMKVVDFTRPQGDVTLAALAIDRIGRGCVDEIIDPFLEPNRDAWTLYSVHKVAELAFRCLAFHSETRPTMMEVAEELETIRHSGWATLEETICVGSSLGSTSSTPHNGSEKSMSGSMVKRAGLGGQILIVPRQNYNGDFSRASMEEVTDSSPVSVQDPWFSEQSSPSTNSLLGNVIH 688
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12659778 12663380 - Bpe019723.1 Bpe06g00237 105175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00237 688 ProSiteProfiles Protein kinase domain profile. 316 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00237 688 Pfam Protein kinase domain 318 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00237 688 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Bpe06g00237 688 MobiDBLite consensus disorder prediction 608 627 - -
Bpe06g00237 688 MobiDBLite consensus disorder prediction 657 688 - -
Bpe06g00237 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Bpe06g00237 688 MobiDBLite consensus disorder prediction 608 625 - -
Bpe06g00237 688 SUPERFAMILY Protein kinase-like (PK-like) 295 590 IPR011009 -
Bpe06g00237 688 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 19 627 - -
Bpe06g00237 688 SMART serkin_6 316 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00237 688 Gene3D Transferase(Phosphotransferase) domain 1 392 602 - -
Bpe06g00237 688 Gene3D Phosphorylase Kinase; domain 1 277 391 - -
Bpe06g00237 688 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 627 IPR045274 GO:0007166
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00738 Bpe-Chr2:5126981 Bpe06g00237 Bpe-Chr6:12659778 5.61E-88 dispersed
Bpe06g00237 Bpe-Chr6:12659778 Bpe11g01222 Bpe-Chr11:9138134 7.24E-85 dispersed
Bpe06g00236 Bpe-Chr6:12559983 Bpe06g00237 Bpe-Chr6:12659778 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63383 PF07714 PK_Tyr_Ser-Thr 6.50E-43 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00237 - - pmum:103340007 805.053