Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00242 ATGTCCCAAGACTATCACCAAGGAATGTTAAGCTTCTCCAATGGCGGTTTGGAGAGATCGGCCATGGCCATAGCTCGACAACAAGAGTCGAACCCTCATCAACAACAACAGATCCGGAGGGAGAAGCTGCGGATGCAAGGGTTCGACCCGTCACCGCCGCCGTTAATAGGGGTAGAAGAAGAAGAATCCGCCGGATTCAATGTTTACGAGAACGCCGGAATGTTATCGGAAATGTTCAATTACCAACCTGAAATGGCGGAGCAGCCGAGTTTCCGACCGGCGAGGCCGGCGAACAACGAGTGGTACGCTAACAGACAAGGAATGGTGGTGGGATTAGGACCATTGGAAGAATTAAAGGCCAGCCGTAATCACCACCATCAGATTTCCACCATTAGTGCAGACTCAGCGGCAGCCATGCAGCTTTTTCTGATGAATCCACAGCCAAGGTCGCCATCACCGCCTCCTCCTTCCTCCACCCTCCACATGCTTCTTCCAAATCCATCTTCTTCTCTCCAACCTTATGGTCAATTCACATGGATTCCAGACGGAGGAAACGCAAACCCAGCTAGTGAAATTAGAGGTATTCCTGAAAGTCAAGGACTCTCTCTCTCACTCTCGTCTTCTTTACCACACCTGGAAGCAGCAAAAGCCGAAGAACTGAGACTCGCCGGAAACGGCGGATTCTTGTTCTACAATCAAGGAGGAGGAGCTTCTTCATCATCCCAATATTCATTTAGAAATCTAGTGAATCAAAACCAGCAATTAACTGGCTCAGATCAACCGATTCACGTCGCGTTTGGAACTTCCCTCGGATCAGTAAATTTGCTAAGAAGCTCAAAGTATTCCAAGGCTGCACAAGAACTACTGGAAGAATTTTGTAGCGTCGGGAAAGCTCAGTTGAAGAGAAACAAGTCCATCAATGAAAGAAAGTCCAACCCTAGCCCGAATCTGGCAAGTGGCACTAATGGTAGTGGAGGAGGCGGCGGTTCTTCGTCTTCTTCAAAAGATCAACATCCTTTGTCATCTTCTGATAGAATGGAGCATCAAAGGAGGAAGGTGGATCGCAGATACCAAAACTACTGCGAGCAAATGCAGATAGTGGTGAATTCATTTGACATGGTGATGGGGTTCGGAGCAGCAGCCCTCTACACTGCCCTCACCCAGAAGGCAATGTCTCGCCACTTTCGATGCCTCAAGGACGCGATTGGCGAGCAACTAAAGCACAGCTGCGAGCTTCTGGGCGAGAAAGACGCAGGAGGGACGTCTGGTTTGACAAAAGGAGAGACGCCCAGGCTGAAGATGTTGGAGCAGAGCTTGAGAAATCAGAGAGCTTTTCATCAAATGGGGATGATGGAACAGGAAGCTTGGCGACCACAACGAGGCTTGCCTGAAAGATCTGTCAACATTTTGAGAGCTTGGCTGTTTGAGCATTTTCTTCACCCGTATCCAAGCGACGCAGATAAGCAACTGTTGGCTCGACAGACAGGTTTATCAAGAAATCAGGTTATTGTGTTTCCTTTATCTTTATGTATATCTAGGGTTTATGTTTTTTTTTTTTATGTCTTGCAGGTGTCAAACTGGTTCATTAATGCTAGGGTTAGGCTATGGAAACCCATGGTGGAAGAGATGTACCAGCAAGAATCAAAAGATGGGGAGGAGGAGGGGGAGGGGGAGGCGGAAGATAGATCAGAAGAGAGAGAAAGGAACAAAAACAATGTGATTTCACAAACTCCAACGCTGTCTCAGACAACCTCACAAACATCACCACCAACAACCAAAACGACAGCTCCACCACCATCGACAACAAAAACGACGACCAAAAGATCCCACTTCAATCCACAAGAAAGCGACCCTTCACTCACTGCAATCAATGCCCAAACCTTCTCGGAAATCCAAGCCAATCAACCCATCTCTTCTGTCACGCCCAATGACCTCCCGCCACCTCACCTTTCGCGCACCTTTCAGGACGCCCAGTTCGGCCGGAAACCCTTTGTAGGTGGCGGAGACAAAGTCACCACCTCCGACGGTGGGTCTTCTGTCAGAAGATTCGGGACGAAGGTGGCCGGTGATGTCTCACTCACCTTAGGCCTACGCCATGCCGGAAACTTGCCCGAGAAGAATTCCTTCTCCGTCCAGGATTTCCGTGGTTATTAA 2154 48.89 MSQDYHQGMLSFSNGGLERSAMAIARQQESNPHQQQQIRREKLRMQGFDPSPPPLIGVEEEESAGFNVYENAGMLSEMFNYQPEMAEQPSFRPARPANNEWYANRQGMVVGLGPLEELKASRNHHHQISTISADSAAAMQLFLMNPQPRSPSPPPPSSTLHMLLPNPSSSLQPYGQFTWIPDGGNANPASEIRGIPESQGLSLSLSSSLPHLEAAKAEELRLAGNGGFLFYNQGGGASSSSQYSFRNLVNQNQQLTGSDQPIHVAFGTSLGSVNLLRSSKYSKAAQELLEEFCSVGKAQLKRNKSINERKSNPSPNLASGTNGSGGGGGSSSSSKDQHPLSSSDRMEHQRRKVDRRYQNYCEQMQIVVNSFDMVMGFGAAALYTALTQKAMSRHFRCLKDAIGEQLKHSCELLGEKDAGGTSGLTKGETPRLKMLEQSLRNQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKQLLARQTGLSRNQVIVFPLSLCISRVYVFFFYVLQVSNWFINARVRLWKPMVEEMYQQESKDGEEEGEGEAEDRSEERERNKNNVISQTPTLSQTTSQTSPPTTKTTAPPPSTTKTTTKRSHFNPQESDPSLTAINAQTFSEIQANQPISSVTPNDLPPPHLSRTFQDAQFGRKPFVGGGDKVTTSDGGSSVRRFGTKVAGDVSLTLGLRHAGNLPEKNSFSVQDFRGY 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12829635 12837208 - Bpe019730.1 Bpe06g00242 105180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00242 717 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 523 706 - -
Bpe06g00242 717 Pfam Homeobox KN domain 473 534 IPR008422 GO:0003677|GO:0006355
Bpe06g00242 717 MobiDBLite consensus disorder prediction 303 352 - -
Bpe06g00242 717 MobiDBLite consensus disorder prediction 572 618 - -
Bpe06g00242 717 SUPERFAMILY Homeodomain-like 458 504 IPR009057 -
Bpe06g00242 717 MobiDBLite consensus disorder prediction 309 339 - -
Bpe06g00242 717 ProSiteProfiles 'Homeobox' domain profile. 453 538 IPR001356 GO:0003677
Bpe06g00242 717 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 53 502 - -
Bpe06g00242 717 MobiDBLite consensus disorder prediction 19 47 - -
Bpe06g00242 717 Pfam Associated with HOX 276 402 IPR006563 -
Bpe06g00242 717 SMART HOX_1 456 542 IPR001356 GO:0003677
Bpe06g00242 717 CDD homeodomain 456 539 IPR001356 GO:0003677
Bpe06g00242 717 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 523 706 - -
Bpe06g00242 717 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 53 502 - -
Bpe06g00242 717 MobiDBLite consensus disorder prediction 546 618 - -
Bpe06g00242 717 Gene3D - 450 552 - -
Bpe06g00242 717 SMART prehox3 270 404 IPR006563 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00242 Bpe-Chr6:12829635 Bpe11g00665 Bpe-Chr11:5111635 3.40E-79 dispersed
Bpe15g00360 Bpe-Chr15:15126255 Bpe06g00242 Bpe-Chr6:12829635 2.21E-22 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00242 - - vvi:100261554 725.317