Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00258 ATGGATATAACCAATACGCGCACAAACAACACCACTACTTGGGATCTTGACCTAATGGCCATGGAAGAACATCTCCTTCACAGCCAAGTTCCTCTCCCTCCCTCTCTCTGGCCGTACTTCCCCACTCCCGTCGATCAAACCACACCCAATCAAGCACCAACCCCGAGTCAGTTTGGAGATCCAGTGGCGAATTCTACAGACGGCGGCGAACAAGAGTCTGATCGAGAAGAGCTTGGTGCAGTGAAGGAAATGATGTATAGAATCGCATCTATGCAGCCAGTGGACATCGACCCAGCCACCATCCGGAAGCCCAAAAGGAAAAACGTTCGAATTAGCGACGACCCTCAGAGCGTCGCAGCCCGTTTACGGAGAGAGAGAATAAGCGAGAAGATACGCATCCTCCAACGTCTCGTTCCGGGAGGAACCAAACTGGACACGGCTTCCATGCTGGACGAAGCAATTCGATACGTCAAGTTCTTGAAAAGACAAATCCGCTTGTTACAGTCCAATCACCATACTCAATGCATTAATGTCGCCATTGGGTCATCTTCTTTAATGCCAATAGACTGGTCTTTGAGAGCCAACGGGGGTGCAACCTCCGATGAACCATGA 612 50.33 MDITNTRTNNTTTWDLDLMAMEEHLLHSQVPLPPSLWPYFPTPVDQTTPNQAPTPSQFGDPVANSTDGGEQESDREELGAVKEMMYRIASMQPVDIDPATIRKPKRKNVRISDDPQSVAARLRRERISEKIRILQRLVPGGTKLDTASMLDEAIRYVKFLKRQIRLLQSNHHTQCINVAIGSSSLMPIDWSLRANGGATSDEP 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13313700 13314311 + Bpe019750.1 Bpe06g00258 105196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00258 203 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 117 171 IPR036638 GO:0046983
Bpe06g00258 203 Coils Coil 150 170 - -
Bpe06g00258 203 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 111 160 IPR011598 GO:0046983
Bpe06g00258 203 SMART finulus 117 166 IPR011598 GO:0046983
Bpe06g00258 203 MobiDBLite consensus disorder prediction 41 76 - -
Bpe06g00258 203 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 65 177 - -
Bpe06g00258 203 Pfam Helix-loop-helix DNA-binding domain 121 160 IPR011598 GO:0046983
Bpe06g00258 203 Gene3D - 115 178 IPR036638 GO:0046983
Bpe06g00258 203 MobiDBLite consensus disorder prediction 41 68 - -
Bpe06g00258 203 CDD bHLH_AtIND_like 112 170 - -
Bpe06g00258 203 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 65 177 IPR045843 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe06g00258 Bpe10g00254 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00430 Bpe-Chr2:2819866 Bpe06g00258 Bpe-Chr6:13313700 5.50E-40 dispersed
Bpe05g00025 Bpe-Chr5:524999 Bpe06g00258 Bpe-Chr6:13313700 5.71E-41 dispersed
Bpe06g00258 Bpe-Chr6:13313700 Bpe10g00254 Bpe-Chr10:9555078 3.89E-88 dispersed
Bpe15g00913 Bpe-Chr15:18942069 Bpe06g00258 Bpe-Chr6:13313700 2.05E-13 dispersed
Bpe06g00258 Bpe-Chr6:13313700 Bpe04g00178 Bpe-Chr4:1152051 9.06E-43 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21549 PF00010 HLH 3.60E-07 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00258 - - pop:7479127 213.001