Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00276 ATGATATTTTCTGGTTCAGAAGAAGACAGTGCTTGCCCTGCAGAGCCTCCGGATCCCGACATTGTAGAATTTGACCCAACTTGCCGCTATATTAGGTACAAAGATGTGCTTGGGAAAGGTGCTTTCAAGACAGTATACAAAGCATTTGATGAAGTAAATGGACTTGAAGTGGCATGGAACCAAGTTCAAATTGATGAGGTTCTACAGTCTCCAGATGACTTAGAAAGGCTATACTCAGAAGTGCACCTCTTAAAGTCCTTGAAGCATAACAACGTTGTGAGATTTTACAATTCATGGATTGATGATAAGAACAAGACCGTTAATATTATTACTGAGTTGTTCACATCCGGAAGCCTCAGACAGTATTGTAAGAAACACAAAAAGGTTGACATGAAGGCAGTGAAGGGATGGGCAAGACAGATTCTGATGGGTTTGAACTACCTCCACGGTCATAATCCACCAATTATACATAGGGACCTGAAGTGCGATAACATATTTATCAACGGTAATCAAGGAGAAGTAAAGATTGGTGACCTTGGGTTGGCAACTATTATGCAGCACGGAACTGCTAAAAGTGTAATTGGCACACCTGAGTTTATGGCTCCTGAACTTTATGATGAAAATTACAATGAGTTGGCTGATATTTATTCTTTTGGGATGTGCATGCTGGAGATGGTGACTTTTGAATACCCTTACAGTGAGTGCAGAAACTCGGCTCAAATATACAAGAAGGTTACTTCTGGTATAAAGCCTGCAGCTCTTTCTAAAGTGAAAGACCAAGATATGAAGCAATTTATAGAAAAGTGTTTAGTTCCTGCATCAGAAAGATCTTCTGCGAAGGAACTTCTAATGGATCCTTTTCTTCAAGCTAATGGATCAGCAAAATTTCATCCTCTGCCACTTCCAGATATCGTTCTTCCCAAATTTGGAACCTTTGGAGATCGTTCTCTTATGTCGGAAGGACCTGCGACTTCACGAAATGCACCAACTTCCATGGATGTAAATAGCGAGGGTGAGCCACCTATCATTACTTCTTTTGACACTTCAGTTGATGGGGATTCCCATTCGCTGTCTGTGGAGGTTAAAAGGACAAAAAGGGGCAATGTCTTCTTGTTGAAAGGGGAACGAAATGACTTGAACTCTATCTCTCTGATACTTCAGATAGCTGATCAAAATGGTCGTGCTCGAAATATCCATTTTATATTCTACCTCGACGGTGACACAGCTCTCTCTCTTTCAAGTGAAATGGTGGAACAACTGGAACTGCCAGACCAAAATGTTATGCTCGTAGCAGAATTGATTGATTTGCTGCTAGTAAACCTAATTCCCAGTTGGAAACCTTGTGTTCGCATAGAGCATTTGGTCGCTGCAAATAGAATAAGATCTTCGAAAGGCAATGGAAAAGATTTTTCAACGCAAAAACAAAAAGATGAAAATGTATTGTTACCGAAGGCACATGAGCCTGGAAATCCTTCATCCTTGCTAGTCCTCCCCAATTCTTACTCGTCCGATACATCAAGTCAAGCAATGCCAGAAAAGTTGGAGAATCCTAAATCCGATCTTATTAGACCTCATTCATACGGTTGCTTATGGGGCGAAACAAGTGCAGATGATAGATTTTCCGAAATGTCTTATGTTTCTGCAACCTCTAATGAGTGCAGCGAGAGGAACTGGTCAATCGATTCATTCATGTCGTTTGAATCTGGATTGATGGACTCCAATCGATGCGGATCACATAGAGCTTCAGGAGTCATAACTCCATATTTGACTGATATGGTTGGAATGCCCGAAATCAAGAACGGGGTATTGGAAATTGGAAGGAACAGCTTGCTTTCCTCCCGTGGTTTTCCGACTGATGGCTCGTGCTTGTCCGATCCTGTGGAAGAGGAGATGAGAACTGAGTTGGAGATAATTGAACTGCAGTTCCAGGAGGCAATGAGGGAGTTGTGCAAGAAAAGACACGATGCCATCATGGAGGCAAGAAAAAGGTTATATAAGAAAAATACAGAAACGTTTTCTTAG 2022 41.44 MIFSGSEEDSACPAEPPDPDIVEFDPTCRYIRYKDVLGKGAFKTVYKAFDEVNGLEVAWNQVQIDEVLQSPDDLERLYSEVHLLKSLKHNNVVRFYNSWIDDKNKTVNIITELFTSGSLRQYCKKHKKVDMKAVKGWARQILMGLNYLHGHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMQHGTAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVTSGIKPAALSKVKDQDMKQFIEKCLVPASERSSAKELLMDPFLQANGSAKFHPLPLPDIVLPKFGTFGDRSLMSEGPATSRNAPTSMDVNSEGEPPIITSFDTSVDGDSHSLSVEVKRTKRGNVFLLKGERNDLNSISLILQIADQNGRARNIHFIFYLDGDTALSLSSEMVEQLELPDQNVMLVAELIDLLLVNLIPSWKPCVRIEHLVAANRIRSSKGNGKDFSTQKQKDENVLLPKAHEPGNPSSLLVLPNSYSSDTSSQAMPEKLENPKSDLIRPHSYGCLWGETSADDRFSEMSYVSATSNECSERNWSIDSFMSFESGLMDSNRCGSHRASGVITPYLTDMVGMPEIKNGVLEIGRNSLLSSRGFPTDGSCLSDPVEEEMRTELEIIELQFQEAMRELCKKRHDAIMEARKRLYKKNTETFS 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13710977 13713938 - Bpe019771.1 Bpe06g00276 105214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00276 673 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 5 670 - -
Bpe06g00276 673 SMART serkin_6 31 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00276 673 Gene3D Transferase(Phosphotransferase) domain 1 114 295 - -
Bpe06g00276 673 ProSiteProfiles Protein kinase domain profile. 31 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00276 673 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 670 - -
Bpe06g00276 673 CDD STKc_WNK 29 288 - -
Bpe06g00276 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Bpe06g00276 673 Coils Coil 628 648 - -
Bpe06g00276 673 SUPERFAMILY Protein kinase-like (PK-like) 33 347 IPR011009 -
Bpe06g00276 673 Pfam Protein kinase domain 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00276 673 Gene3D Phosphorylase Kinase; domain 1 16 112 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00276 Bpe-Chr6:13710977 Bpe15g00655 Bpe-Chr15:17291114 1.52E-158 dispersed
Bpe04g00833 Bpe-Chr4:5464926 Bpe06g00276 Bpe-Chr6:13710977 7.41E-145 transposed
Bpe04g01302 Bpe-Chr4:19366102 Bpe06g00276 Bpe-Chr6:13710977 1.38E-128 transposed
Bpe05g00271 Bpe-Chr5:15721995 Bpe06g00276 Bpe-Chr6:13710977 3.75E-149 transposed
Bpe08g00060 Bpe-Chr8:314245 Bpe06g00276 Bpe-Chr6:13710977 8.74E-138 transposed
Bpe13g01512 Bpe-Chr13:20573758 Bpe06g00276 Bpe-Chr6:13710977 2.65E-145 transposed
Bpe14g00934 Bpe-Chr14:6948767 Bpe06g00276 Bpe-Chr6:13710977 0 transposed
Bpe10g00241 Bpe-Chr10:8994463 Bpe06g00276 Bpe-Chr6:13710977 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63384 PF00069 Pkinase 1.90E-53 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00276 K08867 - vvi:100259251 825.083