Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00288 CTCTTAATTGCAAAAACAATGAAACCCTCTTCCACCTATCCTCACTTCTCTATCCTCCTCCTCCTCGCCTTTCTCTCTCTAAAAGCTTCATCGTCGCCTTCTAGAGATGCCCAACAGCTGATCAACTTCAAAGCTTCACTTCCCGACCCTTCTCTGCTTCAAAACTGGCTCTCCAACGGCGACCCCTGTTCTTTCTCTCACATTACCTGCAAAGAATCCAGAGTTTCCGCAATAGACCTGAGCTTCATCCCCTTAAGCTTAAATTTCAGCTCCGTTTTCTCTTCGCTTTTCGCACTCGACTTATTAGAATCCATCTCGCTGAAATCCACTAATCTAACCGGCGCCATTTTGGTGTCTTCTGGATCCAAGTGCAGCTCTTTGTTGAGCGCCATAGATCTATCTCAGAACAGCTTGTTTGGCCCCATTTCAGACGCTTCTAACTTGGGTTCTTGCTCAAATTTGAAGAGTCTAAATCTGTCGTTCAATTATTTTGATTTTTCAGTGAAGGATGTCACCGGATTGCAGCTGGATTTGCAGGTTCTTGATTTTTCTTTCAATAAAATCGTGGGTTCGAACGTGATACCTTGGATTTTGTCCGCTGGTTGCACCGAAATGCAACACTTGGCGATAAAGGGAAACAAAATCAGCGGGCAAATTGATTTCTCTTCGTGCAAGAATTTAGAGTATTTGGATATCTCTTCCAACAATTTCTCGGCGATTATTCCTTCTTTCGGAGATTGCTCCGTTTTGGAATACCTTGACATCTCCAGCAACAAATTTTCCGGCGACGTCGGACGACCTCTTCCTGGTTGCAAACAGCTCAGCTTCCTTAATCTCTCCACAAACAATCTTTCCGGTCAAATACCGGCGTTCTCTTCCCGGAACTTAAGGTTTCTCTCACTGTCTGACAACGATTTTCAGGGCCAGATTCCGGCCCATCTTGCCGATTCTTGCTCTGGTTTGATAGAACTAGACCTTTCGCTAAATAACTTATCCGGTGAAGTTCCTTCTGCTCTGGGTTTGTGTTCTTCTCTTCAATTTTTGGATATTTCGAGCAATAATTTATCTGGTGAATTTCCCATTTCGATCTTCACTTCAATGGTTAGCTTGAATGTGCTTTCTCTCTCCGACAACAAATTTTCTGGGTTGCTGCCGGTTTCTCTTTCTAATTTCACCAGCTTGGAGACTTTGGATCTGAGTTCGAATAATTTCTCTGGGTCGATTCCGTCGATGCTCTGTCAGTACTCTGGCAACAACTTAAAGGAGATGTTTCTCCAGAATAATCTGTTAATGGGTTCTATTCCGGAGACTCTGAGCAACTGTTCTCAGCTCGTTTCTCTTGATTTGAGCTTCAATTTTCTCACCGGAGCTATTCCATCCAGCCTAGGCTCCCTTTCTAAGCTCCGGAATCTGATGATTTGGTTGAATCAGCTTGAAGGACAGATCCCCGAAACGCTGAAGTTCATTCCGGCGCTTGAGAATCTGATTCTTGATTTCAACTTTCTCACCGGAACTATTCCCTCTGGACTAAGCAACTGCACGAACCTGAACTGGATTTCCCTATCCAACAACCAGTTAAGTGGCGAGATCCCAGCTTGGATAGGCGGTCTTCCTAGCCTAGCCATCCTCAAACTAAGCAACAACTCATTCACCGGCAGAATACCCCCGGAGCTCGGGGACTGCCGGAGCTTGATCTGGTTGGACCTCAACACCAACTTCTTAAACGGGACAATTCGCCCGGAGCTTTTCAAGCAATCTGGTAACATTGCGGTGAACTTCATCACCGGAAAATCATATGTTTACATCAAAACTGACGGCAGCAAGGAGTGTCACGGAGCTGGAAGTTTACTGGAATTCGCAGGAATTCGTCACGAACAAGTGAACAGAATCTCAAGCAGAAGTCCTTGCAACTTCACCAGAGTTTACAGTGGTATGACCCAGCCCACATTTAACCACAATGGATCCATGATTTTTCTTGATATTTCTCATAACATGTTATCTGGTAGTATCCCCAAAGAGATTGGCTCGACAAATTACCTCTACATTCTGAATTTGGGTCATAACAAACTGACTGGAACGATCCCTCAAGAACTAGGCAACCTCAGAAGTCTCAACATTCTTGATCTCTCGAGTAACATGCTCGAAGGGTCGATCCCGCCCTCCTTGACCGGCCTTTCCTTGCTTATGGAGATTAATTTGTCTAATAATCTCTTGAATGGAACAATCCCAGAATCAGGTCAGTTCGAAACTTTTCCGGCGTCTGGTTTTTTGAACAATTCCGGCCTCTGTGGATACCCTCTTCCCAAATGTGGGGCTGATTCCGGGTCAAGCTCAGACTCCCAACAGGAGAAGTCCCACCGGAAACAAGCTTCCCTTGCTGGAAGCGTGGCAATGGGCCTGTTGTTTTCACTTTTCTGCATATTTGGTTTGATCATAGTTGCCATAGAAACCAGGAAGAGAAGGAAGAAGGATTTGACTCTCGATATTTACGTGGACAGCCATTCTCATTCAGGCACTGCAAATACGAGCTGGAAGCTAACCAGTGCTCGAGAAGCAGTAAGCATAAATCTTGCCACCTTTGAGAAACCATTACGAAAGCTCACATTTGCAGACCTTCTCGAGGCCACTAATGGCTTCCACAACGACAGCCTAGTCGGCTCCGGCGGATTTGGTGATGTTTACAAAGCAAATTTGAAGGACGGAAGCGTTGTGGCAATTAAGAAACTAATACATATAAGTGGTCAGGGGGATAGAGAATTCACAGCAGAAATGGAAACGATAGGAAAAATCAAGCACAGAAACCTCGTCCCCCTCCTTGGATATTGCAAAGTCGGAGAAGAACGGCTTCTGGTTTATGAGTACATGAAATACGGAAGCCTCGAAGACGTTCTACACGACCAGAAAAAGGTTGGAATCAAGCTGAATTGGGGAGCGAGGAGGAAAATCGCCATTGGAGCAGCAAGAGGACTAGCTTTTCTTCACCATAATTGCACTCCCCACATAATTCACAGAGACATGAAATCGAGCAATGTTCTGCTCGATGAGAATTTAGAAGCTCGAGTCTCGGATTTCGGAATGGCGAGGCTGATGAGCACGATGGACACCCATTTGAGCGTTAGCACCCTCGCCGGAACTCCTGGCTACGTCCCACCAGAGTACTACCAGAGCTTCCGATGTTCCACGAAAGGGGACGTTTATAGCTATGGAGTCGTTCTACTCGAGCTTCTAACGGGGAAACGACCAACGGACTCCGTAGATTTCGGGGATAATAATCTGGTCGGATGGGTAAAAATGCACGCCAAATTGAAAATAAGTAATGTTTTCGATCTGGAGCTCATGAAAGAGGATCCAAACCTTGAGATCGAGCTTTTGCAGCACTTGAAGGTAGCCTGTGCTTGCCTGGACGACCGGCCGTGGAGGCGGCCAACCATGATTCAAGTGATGGCGATGTTTAAGGAAATTCAGGCCGGGTCGGGAATTGATTCCCAATCCACGATTTCATCGGACGGCAAAGGATTCAGCGGGGTCGGGGGAGTAGAGATGAGCATAAAAGAAGGGCCAGAACTCAGCAAACAGTAG 3579 45.99 LLIAKTMKPSSTYPHFSILLLLAFLSLKASSSPSRDAQQLINFKASLPDPSLLQNWLSNGDPCSFSHITCKESRVSAIDLSFIPLSLNFSSVFSSLFALDLLESISLKSTNLTGAILVSSGSKCSSLLSAIDLSQNSLFGPISDASNLGSCSNLKSLNLSFNYFDFSVKDVTGLQLDLQVLDFSFNKIVGSNVIPWILSAGCTEMQHLAIKGNKISGQIDFSSCKNLEYLDISSNNFSAIIPSFGDCSVLEYLDISSNKFSGDVGRPLPGCKQLSFLNLSTNNLSGQIPAFSSRNLRFLSLSDNDFQGQIPAHLADSCSGLIELDLSLNNLSGEVPSALGLCSSLQFLDISSNNLSGEFPISIFTSMVSLNVLSLSDNKFSGLLPVSLSNFTSLETLDLSSNNFSGSIPSMLCQYSGNNLKEMFLQNNLLMGSIPETLSNCSQLVSLDLSFNFLTGAIPSSLGSLSKLRNLMIWLNQLEGQIPETLKFIPALENLILDFNFLTGTIPSGLSNCTNLNWISLSNNQLSGEIPAWIGGLPSLAILKLSNNSFTGRIPPELGDCRSLIWLDLNTNFLNGTIRPELFKQSGNIAVNFITGKSYVYIKTDGSKECHGAGSLLEFAGIRHEQVNRISSRSPCNFTRVYSGMTQPTFNHNGSMIFLDISHNMLSGSIPKEIGSTNYLYILNLGHNKLTGTIPQELGNLRSLNILDLSSNMLEGSIPPSLTGLSLLMEINLSNNLLNGTIPESGQFETFPASGFLNNSGLCGYPLPKCGADSGSSSDSQQEKSHRKQASLAGSVAMGLLFSLFCIFGLIIVAIETRKRRKKDLTLDIYVDSHSHSGTANTSWKLTSAREAVSINLATFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKANLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDQKKVGIKLNWGARRKIAIGAARGLAFLHHNCTPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSTMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSVDFGDNNLVGWVKMHAKLKISNVFDLELMKEDPNLEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGSGIDSQSTISSDGKGFSGVGGVEMSIKEGPELSKQ 1192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13933085 13936663 + Bpe019784.1 Bpe06g00288 105226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00288 1192 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 16 1166 - -
Bpe06g00288 1192 SUPERFAMILY L domain-like 645 766 - -
Bpe06g00288 1192 SMART serkin_6 879 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00288 1192 ProSitePatterns Protein kinases ATP-binding region signature. 885 908 IPR017441 GO:0005524
Bpe06g00288 1192 Pfam Leucine Rich Repeat 444 465 IPR001611 GO:0005515
Bpe06g00288 1192 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1001 1013 IPR008271 GO:0004672|GO:0006468
Bpe06g00288 1192 Gene3D Ribonuclease Inhibitor 40 770 IPR032675 -
Bpe06g00288 1192 Pfam Protein kinase domain 879 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00288 1192 Gene3D Phosphorylase Kinase; domain 1 839 954 - -
Bpe06g00288 1192 ProSiteProfiles Protein kinase domain profile. 879 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00288 1192 Pfam Brassinosteroid receptor island domain 587 651 IPR045381 -
Bpe06g00288 1192 CDD STKc_IRAK 885 1154 - -
Bpe06g00288 1192 SUPERFAMILY L domain-like 34 290 - -
Bpe06g00288 1192 SUPERFAMILY Protein kinase-like (PK-like) 860 1151 IPR011009 -
Bpe06g00288 1192 Gene3D Transferase(Phosphotransferase) domain 1 955 1156 - -
Bpe06g00288 1192 SMART LRR_typ_2 701 725 IPR003591 -
Bpe06g00288 1192 SMART LRR_typ_2 391 415 IPR003591 -
Bpe06g00288 1192 SMART LRR_typ_2 367 390 IPR003591 -
Bpe06g00288 1192 SMART LRR_typ_2 537 561 IPR003591 -
Bpe06g00288 1192 SMART LRR_typ_2 489 513 IPR003591 -
Bpe06g00288 1192 SMART LRR_typ_2 224 247 IPR003591 -
Bpe06g00288 1192 PANTHER SYSTEMIN RECEPTOR SR160 16 1166 - -
Bpe06g00288 1192 MobiDBLite consensus disorder prediction 1160 1192 - -
Bpe06g00288 1192 PRINTS Leucine-rich repeat signature 701 714 - -
Bpe06g00288 1192 PRINTS Leucine-rich repeat signature 345 358 - -
Bpe06g00288 1192 SUPERFAMILY RNI-like 269 576 - -
Bpe06g00288 1192 Gene3D - 592 652 - -
Bpe06g00288 1192 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Bpe06g00288 1192 Pfam Leucine rich repeat 362 404 IPR001611 GO:0005515
Bpe06g00288 1192 Pfam Leucine rich repeat 680 738 IPR001611 GO:0005515
Bpe06g00288 1192 Pfam Leucine rich repeat 226 284 IPR001611 GO:0005515
Bpe06g00288 1192 Pfam Leucine rich repeat 490 549 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00288 Bpe-Chr6:13933085 Bpe10g00236 Bpe-Chr10:8793021 0 dispersed
Bpe12g00532 Bpe-Chr12:11216312 Bpe06g00288 Bpe-Chr6:13933085 3.26E-18 dispersed
Bpe06g00288 Bpe-Chr6:13933085 Bpe04g01056 Bpe-Chr4:7837449 3.95E-150 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63385 PF00069 Pkinase 1.90E-45 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00288 K13415 - csv:101209118 1778.45