Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00295 ATGCCTGCTTGGTTTGGGAAAAAGTCCACCAAGAGTAAAGAGCAGCCAAACCAGCTTCAAGAGGAAGACTTCCACAGCAGCCACATCAAATTTTCAAAATCTTCCATAAAAACTGACCAGAAATCGAGAGATAATCCCAAGAGTTTTGACGACGCTTCCGCCATATCTGTCTCCCATAAATCGCCGAGGTCAAGCAGAGATCTCGGACTATCAGGCGGCGGCGCTTATGGGTCTTGTGGATTTTCCGGTTTTGATTCCGATAGCTCGGAGAGGAAAGGTCATCCTCTTCCTCAGCCATCAGTTTCTACGACGCATAACTTTGTGGTAGATCATGGGGTCGGAATTGGATCTGGGTCGGTTTCAGTTTCGAGTGTTAGTTCTTCGGGATCTTCCGATGATCATCCGATTGCTCAAACCGATTCTAAAATGGATCCCTCAACCGTGTGGCGAAATGCTATTGTTGCTTCGGATTCTCCACGCACAGATTCCACAACGAGAAGTTTTGGAACAGGATCAAGGGGGCCGACCAGCCCTTCCTCCCCTCTTAACTCTCGGCTATGTGGGTTCAGCGTGGAATCTCCGTCTGGAAAGGTTGACGATGGGAAGAGCCAATGCCATCGTTTGCCACTCCCACCGAGCTCTCCGACTAGCCCTTCTGCCTTGCCTAACTTCAGACCGGTTGGAGCTGCTGAAAACTCTCTCTCCCAGCCTTGTTGGAAGAAGGGTCGGCTTCTAGGACGAGGAACTTTTGGACATGTTTACCTCGGATTCAATAGTGTAAGTGGGCAAATGTGTGCGATAAAGGAAGTCAAGGTCATTGGCGATGACTCGTCATCGAAAGAATCCCTCAAACAACTGAACCAGGAGATAAATTTGCTTAGCCAGCTTTCTCACCCAAATATCGTTCGTTATTACGGAAGTGAAATGGGTGATGAAGCGCTCTCGGTTTATTTAGAATATGTCTCAGGTGGCTCGATCTACAAATTACTTCAAGAATATGGAGCATTCAAGGAACCTGTAATGCAGAATTATACAAGGAAAATCATTGCTGGACTCGTATATCTCCACGCAAGAAATACGGTGCACAGGGACATCAAAGGGGCTAACATATTAGTAGATCCCAATGGTGAGATCAAGTTGGCAGATTTTGGCATGGCAAAACATATAACCAGCTGCAGTTCAATGCTGTCTTTCAAAGGAAGTCCTCATTGGATGGCACCTGAGGTTGTGATGAACACTAACGGCTACAATCTTGCGGTGGATGTTTGGAGCTTAGGTTGTACGGTTCTCGAAATGGCAACCTCGAAACCGCCATGGAGCAAGTACGAAGGGGTGGCTGCCATATTTAAAATAGGAAACAGCAAAGAGCTTCCCGAAATTCCCGATCATCTCTCGAACGATGCAAAAAGTTTCATCAGACTCTGCCTTCAGCGGGAGCCTTCTGCACGCCCAACAGCGGCACAATTACTAGAACACCCTTTTGTTCGAGACCAATTCTCACCTAAAGTTTCCAATGTCACCACCCCTGTCGATGTTTTCCCCTTTGCCTTTGACGGAAGCCATACACCTCCAAGATTAGATCATCTCGCTAATCGGAAAAGTATTAGCACGGGTGACGGAGAATACATGCAAAAACCCGTTGTAACGACGGCGAGAATGACAAGAAGATCGAGTGAATATGTGAGATTGATCACATCGTTACCGGTCTCTCCCTGTTCGAGCCCATTACGGCAGCGTGGACATGAACAGAGAAGCTTCTTACCTTCGCCACCACGAGCGTCTTACTCTACAATGATGGGCCATAATGGATATTCCAATTGGAACGACTTGTCACCACACGCAACGAGGCCGAACGCAATGTACAATCTCGATCCTACCCCTCTAATCAGAGTCCATGCGCCTGGTGGATCTCCAAGGACTAGACCCATTTAA 1932 47.52 MPAWFGKKSTKSKEQPNQLQEEDFHSSHIKFSKSSIKTDQKSRDNPKSFDDASAISVSHKSPRSSRDLGLSGGGAYGSCGFSGFDSDSSERKGHPLPQPSVSTTHNFVVDHGVGIGSGSVSVSSVSSSGSSDDHPIAQTDSKMDPSTVWRNAIVASDSPRTDSTTRSFGTGSRGPTSPSSPLNSRLCGFSVESPSGKVDDGKSQCHRLPLPPSSPTSPSALPNFRPVGAAENSLSQPCWKKGRLLGRGTFGHVYLGFNSVSGQMCAIKEVKVIGDDSSSKESLKQLNQEINLLSQLSHPNIVRYYGSEMGDEALSVYLEYVSGGSIYKLLQEYGAFKEPVMQNYTRKIIAGLVYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHITSCSSMLSFKGSPHWMAPEVVMNTNGYNLAVDVWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKELPEIPDHLSNDAKSFIRLCLQREPSARPTAAQLLEHPFVRDQFSPKVSNVTTPVDVFPFAFDGSHTPPRLDHLANRKSISTGDGEYMQKPVVTTARMTRRSSEYVRLITSLPVSPCSSPLRQRGHEQRSFLPSPPRASYSTMMGHNGYSNWNDLSPHATRPNAMYNLDPTPLIRVHAPGGSPRTRPI 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14077626 14081840 + Bpe019791.1 Bpe06g00295 105233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00295 643 MobiDBLite consensus disorder prediction 93 107 - -
Bpe06g00295 643 MobiDBLite consensus disorder prediction 117 190 - -
Bpe06g00295 643 ProSiteProfiles Protein kinase domain profile. 239 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00295 643 MobiDBLite consensus disorder prediction 49 65 - -
Bpe06g00295 643 CDD STKc_MEKK1_plant 239 495 - -
Bpe06g00295 643 SUPERFAMILY Protein kinase-like (PK-like) 239 548 IPR011009 -
Bpe06g00295 643 MobiDBLite consensus disorder prediction 14 48 - -
Bpe06g00295 643 MobiDBLite consensus disorder prediction 572 591 - -
Bpe06g00295 643 Gene3D Transferase(Phosphotransferase) domain 1 238 511 - -
Bpe06g00295 643 ProSitePatterns Protein kinases ATP-binding region signature. 245 268 IPR017441 GO:0005524
Bpe06g00295 643 Pfam Protein kinase domain 240 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00295 643 MobiDBLite consensus disorder prediction 1 227 - -
Bpe06g00295 643 SMART serkin_6 239 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00295 643 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 1 624 - -
Bpe06g00295 643 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 624 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01865 Bpe-Chr2:20720127 Bpe06g00295 Bpe-Chr6:14077626 5.92E-92 dispersed
Bpe06g00295 Bpe-Chr6:14077626 Bpe12g00439 Bpe-Chr12:10156906 5.93E-140 dispersed
Bpe10g00202 Bpe-Chr10:6900823 Bpe06g00295 Bpe-Chr6:14077626 3.87E-17 dispersed
Bpe14g00247 Bpe-Chr14:2619583 Bpe06g00295 Bpe-Chr6:14077626 3.57E-41 dispersed
Bpe06g00295 Bpe-Chr6:14077626 Bpe02g00081 Bpe-Chr2:608986 2.33E-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63386 PF00069 Pkinase 1.50E-71 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00295 K04421 - cpap:110816131 735.332