Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00299 ATGAACGGTGGGAACAACCGTAAACGGCCTGCGCCGTCGCCGGCGCAGAAACCTTCTCCGTCTCCGCAGGTAGAGCGGTTGGCAACATCGCAAGAGGAAGAGTATTTGGACGAAGACGTCTTCCTCGACGAAACTCTGTTAACCGAGGACGAGCTCATCCTGCGCGACATTGAGGAGCGCCAGGCCCTCGCTTCCCGTCTCTCGAAGTGGACTCGCCCTCCGCTGTCTTCCGCTTATGTTTCTCAATCTCAGAGCGTTGTGTTTCAGCAGCTGGAGATCGACTACGTGATTGGAGAGAGTAACCGAGAATTATTGCCTAATTCCGCTGGCCCCGCCGCCATCATCAGAATTTTTGGTGTTACCAGAGAAGGACACAGTGTTTGCTGCAACGTCCATGGATTTGAACCTTACTTTTATATCAGCTGTCCTCCTGGAATGGGTCCTGATGATATCTCCCGGTTCCAACAAGTTCTTGAGGCGAGAATGAGGGAGGTAAATAAAAACAGTAAGGTGCCCAAATATGTTCATCGAATCGAGTTAGTGCAAAAAAGAAGTATCATGTACTATCAGCAACAAACGTCTCATCCTTTCCTCAAAATTGTAGTTGCACTACCAACAATGGTCACAAGCTGCCGGGGTATTCTCGACAGAGGCATACAAATTGATGGGCTTGGAATGAAGAGCTTCATGACTTATGAAAGCAATGTTCTTTTTGCTCTGCGATTCATGATTGATTGCAACATTGTTGGTGGAAATTGGATTGAAGTACCTGTGGGAAAATATAGGAAAACAGCAAAAATCCTGTCATGCTGTCAGTTGGAGTTTGATTGCCTGTATCCAATCCAATTTCTGATGCTTGACAGTATCCCCTTAACAGCCCTTGGTAGTTATTCAGAGTTGATCAGCCATGCCCCAGAAGGTGAATTTTCAAAGATGGCTCCCTTCCGGATATTGAGTTTTGATATTGAGTGTGCAGGTCGTAAAGGCCATTTTCCCGAGCCCACCCATGATCCTGTCATCCAGGTGGCCAATCTAGTTACTCTCCAAGGGGAGGAGCAGCCTTTTATCCGCAATGTCATGACCCTTAACTCTTGCTCTTCTATAGCTGGTGTTGATGTAATGTCATTTGAGACAGAAAGAGAAGTTTTACTTGCATGGAGGGATTTTATCGGCGAAGTGGACCCTGATGTGGTGATTGGATATAACATCTGCAAATTCGATTTGCCTTATCTCATCGAGAGAGCTGAGAAATTGGGAATCTCTGAATTTCCAATACTGGGTCGCATCAGAAACAGCAGGGTTCGGGTCAAAGATACAACTTTCTCTTCTAGACAGCTTGGAACTAGGGAAGGTAAAGAAATTACAATAGAAGGGAGAGTTCAGTTTGATTTGCTCCAGGTTATGCAACGTGATTACAAACTGAGTTCTTATTCACTGAATTCTGTTTCGTCACATTTTCTTTCTGAACAGAAAGAAGATGTACACCATTCTATTATATCTGATTTACAGAACGGTAATTCTGAAACCAGGAGGCGTTTGGCCGTTTATTGTTTGAAGGACGCATATCTTCCACAACGGCTGTTGGACAAACTGATGTTCATTTACAATTATGTGGAGATGGCTCGAGTCACAGGTGTCCCAATTTCGTTTCTTCTTTCTAGAGGGCAGAGTATCAAGGTATTATCTCAACTTCTTCGGAAGGCAAAACAAAAGAATCTCGTGATTCCAAATGCGAAACAAGCAGGATCTGAGCAAGGAACTTTTGAAGGTGCCACTGTTTTAGAGGCAAGAGCAGGATTTTATGAAAAGCCCATTGCTACATTAGATTTTGCGTCTTTGTATCCCTCCATTATGATGGCATATAATTTATGTTACTGCACCTTGGTAACTCCTGAAGATGTTCGCAAACTAAACCTTCCTCAAGAACTAGTTAATAGAACTCCTTCCGGGGAAACATTTGTTCGTTCAAATTTGCAAAAGGGCATACTTCCTGAAATTCTCGAAGAACTATTAACTGCTCGAAAAAGAGCAAAAGCAGATCTAAAGGAAGCTAAAGACCCTTTTGAGAAGGCGGTATTAGATGGGCGGCAGCTGGCTTTGAAGATAAGTGCAAATTCAGTATATGGATTTACAGGAGCCACAGTTGGCCAGTTACCTTGCTTAGAGATATCTTCAAGTGTTACAAGCTATGGTCGACAAATGATTGAACACACAAAAAAGCTTGTGGGAGATAAATTTACCACAGTCGGTGGCTATGAACACAATGCTGAGGTTATATATGGCGATACAGATTCTGTGATGGTGCAGTTTGGCGTGCCCACTGTGGAAGAGGCAATGAACTTGGGAAGAGAAGCGGCTGAATATATCAGTGGCACTTTTATTGAACCCATTAAACTAGAGTTCGAGAAGGTTTATTATCCATATCTTTTAATTAGCAAAAAGAGATACGCTGGTTTGTTATGGACCAATAGGGAAAAGTTTGACAAAATGGATACAAAAGGCATTGAAACAGTTCGAAGAGACAATTGTCTGTTGGTAAAAAACCTGGTTACCGAGTGCCTGAACAAAATTCTCATTGACAGAAACATTCCTGGTGCAGTACAATATGTCAAGAACATAATTTCCGATCTTCTTATGAATCGCATGGATTTATCACTTCTGGTCATTACCAAGGGTTTGACCAAGACAGGAGATGATTATGAAGTGAAGGCAGCTCATGTCGAACTTGCTGAGCGCATGCGCAAGCACTTCAGCCTTCTATATCCTTTTTTAAACTGCCCACAACTTCCCCAAACTACAACTGTCGTTCCTTTTCCTGACCCCCATATGCAACATTATGTTGGCAGATTTTATCAGCGAGATGCTGCTACAGCTCCGAATGTTGGGGATCGAGTACCTTATGTGATAATCAAAGCCGCAAAAGGAGCGAAAGCGTACGAGAAGTCAGAAGATCCTATTTTTGTTCTAGAAAATAACATACCAATCGATCCTCAATATTATCTTGAAAATCAAATTAGCAAGCCACTATTACGAATTTTTGAACCCATATTGAAGAATGCCAGCAAGGAACTTCTTCATGGAAGTCATACACGATCAATCTTTATCTCGACTCCTTCAAACAGCGGCATAATGAAATTTGCCAAAAAACAACTTACTTGCATTGGCTGCAAAGCTCTACTGAGCAATACGGATAAAACTCTGTGCTCACATTGCAAAGGGAGGGAAGCAGAACTTTACTGCAAAGCTGTGACAAATGTATCAGAGCTTGAGATGCTTTTTGGGAGGCTGTGGACACAGTGCCAAGAATGTCAGGGATCTCTTCACCAAGATGTCCTTTGCACTAGTCGTGATTGTCCAATATTTTATCGTAGAAAGAAAGCACAGAAAGACATGGCTGAAGCCAGGATGCAATTAGATCGCTGGAATTTTTAA 3432 42.72 MNGGNNRKRPAPSPAQKPSPSPQVERLATSQEEEYLDEDVFLDETLLTEDELILRDIEERQALASRLSKWTRPPLSSAYVSQSQSVVFQQLEIDYVIGESNRELLPNSAGPAAIIRIFGVTREGHSVCCNVHGFEPYFYISCPPGMGPDDISRFQQVLEARMREVNKNSKVPKYVHRIELVQKRSIMYYQQQTSHPFLKIVVALPTMVTSCRGILDRGIQIDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPVGKYRKTAKILSCCQLEFDCLYPIQFLMLDSIPLTALGSYSELISHAPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEEQPFIRNVMTLNSCSSIAGVDVMSFETEREVLLAWRDFIGEVDPDVVIGYNICKFDLPYLIERAEKLGISEFPILGRIRNSRVRVKDTTFSSRQLGTREGKEITIEGRVQFDLLQVMQRDYKLSSYSLNSVSSHFLSEQKEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNAKQAGSEQGTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPQELVNRTPSGETFVRSNLQKGILPEILEELLTARKRAKADLKEAKDPFEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVGDKFTTVGGYEHNAEVIYGDTDSVMVQFGVPTVEEAMNLGREAAEYISGTFIEPIKLEFEKVYYPYLLISKKRYAGLLWTNREKFDKMDTKGIETVRRDNCLLVKNLVTECLNKILIDRNIPGAVQYVKNIISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKHFSLLYPFLNCPQLPQTTTVVPFPDPHMQHYVGRFYQRDAATAPNVGDRVPYVIIKAAKGAKAYEKSEDPIFVLENNIPIDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSIFISTPSNSGIMKFAKKQLTCIGCKALLSNTDKTLCSHCKGREAELYCKAVTNVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEARMQLDRWNF 1143
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14263978 14282863 - Bpe019799.1 Bpe06g00299 105237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00299 1143 MobiDBLite consensus disorder prediction 1 30 - -
Bpe06g00299 1143 Gene3D - 314 532 IPR036397 GO:0003676
Bpe06g00299 1143 Pfam C4-type zinc-finger of DNA polymerase delta 1053 1124 IPR025687 -
Bpe06g00299 1143 CDD POLBc_delta 587 1017 - -
Bpe06g00299 1143 Pfam DNA polymerase family B, exonuclease domain 121 482 IPR006133 -
Bpe06g00299 1143 SUPERFAMILY DNA/RNA polymerases 571 1018 IPR043502 -
Bpe06g00299 1143 Pfam DNA polymerase family B 546 915 IPR006134 GO:0000166|GO:0003677
Bpe06g00299 1143 Pfam DNA polymerase family B 941 1016 IPR006134 GO:0000166|GO:0003677
Bpe06g00299 1143 SUPERFAMILY Ribonuclease H-like 112 552 IPR012337 -
Bpe06g00299 1143 PANTHER DNA POLYMERASE DELTA CATALYTIC SUBUNIT 84 1143 - -
Bpe06g00299 1143 Gene3D DNA Polymerase, chain B, domain 1 91 267 - -
Bpe06g00299 1143 CDD DNA_polB_delta_exo 310 538 - -
Bpe06g00299 1143 Gene3D - 814 926 IPR042087 -
Bpe06g00299 1143 TIGRFAM pol2: DNA polymerase (pol2) 581 916 - -
Bpe06g00299 1143 Gene3D Helix hairpin bin 661 713 - -
Bpe06g00299 1143 Gene3D - 930 1026 IPR042087 -
Bpe06g00299 1143 Gene3D Palm domain of DNA polymerase 588 813 IPR023211 -
Bpe06g00299 1143 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 84 1143 - -
Bpe06g00299 1143 PRINTS DNA-directed DNA-polymerase family B signature 605 618 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bpe06g00299 1143 PRINTS DNA-directed DNA-polymerase family B signature 758 766 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bpe06g00299 1143 PRINTS DNA-directed DNA-polymerase family B signature 697 709 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bpe06g00299 1143 SMART polmehr3 313 772 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bpe06g00299 1143 ProSitePatterns DNA polymerase family B signature. 760 768 IPR017964 GO:0000166|GO:0003676
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00299 Bpe-Chr6:14263978 Bpe09g00594 Bpe-Chr9:14671232 4.98E-09 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00299 K02327 - vvi:100246530 1880.53