Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00332 ATGTTGTCGGCCGTGTTGCTGTGTGCAGTGTCGTTGCTTGTCATATACTTGACACGCTATTTCATCAGATGGTACAATCCCAAATGCGCCGGCGTTCTTCCGCCTGGTTCAATGGGGATTCCCCTAATCGGAGAGACCATTCAGCTCATCATTCCCGGCCGGACCCTCGATCTTCCTCCCTTCATCAAGAAGAGAATCCACCGGTATGGACCCATTTTCAAAACCGGATTGTTGGGTCGACCCATCATTGTTTCGGCCGATACAGTGATCAACAACTTCATTTACCAGCAAGAAGGGAAGTTAGTGGAACTATATTATCTGGACTCTATCTCTGAGGTCTTCAATCAAGACGGAGAGTCCAAGACGACGGCCGGCGGCCTTGTTCATAAGTACTTGAGGAGCATCACTCTCAATCACTTCGGCTCCGAGAAGCTCAGAGAAAATCTGCTCTTTCAAATAGAACTCGCCGTCAACAAAACCCTGAAAAACTGGTCATCCCAGTCCTCCGTCGAAGTCCAACGCGAAACCTTAAGAATGCTGTACAACTTCAACGCAGAACAACTGTACGGCTACGATGCTGAAAAATCTTCAGTTAATGTAAGCGAGTGCTTAATCACCATTGCGGAGGGATTTATGGCTTTCCCCTTGAATTTCCCTGGGACTAAACATCATAAAGTCTTAAAGTCCCAGAAGAAGCTGGTTGATATGTTTTGGAGTCTATTGAGAGAGAGGAGATCTTCACCTAATAGAGAGAAGAGAAACGATTTCCTCGACCAAGCAATCGACGATATCGGTTCGGAGAAGTTTCAATCCGAGCAGTTTGTCGTGAATTTGATCTTCGGAATACTTTTCGCTAGTGGATCCATCTCCGGATCCTTAACGTTGATGTTCAAGTTACTTGCTGAGAATCCATCTGTGGTTCAGGAATTGACTGCCGAGCATGAAGCAATTCTCAAGAAAAGAGATGGTTTAACTTCTTCAATCACTTGGGATGAATATAAATCCATGCATTTTACCCTGCAAGTTATTAATGAAACTTTGAGACTCACAAACGCATTGCCGTTTCTGCTGCGGAGAGCAGTCAAAGAATTTCAAGTCAAAGGATATACAATTCCAGCTGGGTGGACGATAATGGTGCTCAACTCTGCCCTACATTTAAACCCTGAAATCTACAGAGACCCACTAGAATTCAATCCATGGCGGTGGAAGGAGCGGGACCAACTGGCCAAGAGCTTCATGCCGTTTGGAGGAGGAACAAGACAGTGCGCAGGAGCAGAATACACTAGGGTTTTCATGGCCACTTTCATCCACACCATGGTCACGAAATATAGGTGGACGAAGGTGAAAGGAGGAGAGATTTCTCGAACTCCGATTCTGAAATTCGGAGACGGTATACATGTCAAGTTCACAGCCAAGTAA 1419 45.67 MLSAVLLCAVSLLVIYLTRYFIRWYNPKCAGVLPPGSMGIPLIGETIQLIIPGRTLDLPPFIKKRIHRYGPIFKTGLLGRPIIVSADTVINNFIYQQEGKLVELYYLDSISEVFNQDGESKTTAGGLVHKYLRSITLNHFGSEKLRENLLFQIELAVNKTLKNWSSQSSVEVQRETLRMLYNFNAEQLYGYDAEKSSVNVSECLITIAEGFMAFPLNFPGTKHHKVLKSQKKLVDMFWSLLRERRSSPNREKRNDFLDQAIDDIGSEKFQSEQFVVNLIFGILFASGSISGSLTLMFKLLAENPSVVQELTAEHEAILKKRDGLTSSITWDEYKSMHFTLQVINETLRLTNALPFLLRRAVKEFQVKGYTIPAGWTIMVLNSALHLNPEIYRDPLEFNPWRWKERDQLAKSFMPFGGGTRQCAGAEYTRVFMATFIHTMVTKYRWTKVKGGEISRTPILKFGDGIHVKFTAK 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14728914 14731054 + Bpe019830.1 Bpe06g00332 105270

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00332 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Bpe06g00332 472 Pfam Cytochrome P450 34 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe06g00332 472 SUPERFAMILY Cytochrome P450 33 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe06g00332 472 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe06g00332 472 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe06g00332 472 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe06g00332 472 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe06g00332 472 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe06g00332 472 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe06g00332 472 PANTHER CYTOCHROME P450 26 10 452 - -
Bpe06g00332 472 Gene3D Cytochrome P450 28 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe06g00332 472 PANTHER CYTOCHROME P450 87A3-LIKE 10 452 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00332 - - - csv:101207333 654.44
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00332 Bpe-Chr6:14728914 Bpe13g00450 Bpe-Chr13:12015771 8.73E-83 dispersed
Bpe08g01478 Bpe-Chr8:15513581 Bpe06g00332 Bpe-Chr6:14728914 1.34E-148 transposed
Bpe15g00788 Bpe-Chr15:18135535 Bpe06g00332 Bpe-Chr6:14728914 1.99E-178 transposed
Bpe10g00298 Bpe-Chr10:10400097 Bpe06g00332 Bpe-Chr6:14728914 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1175 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe06g00332 . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001690 4 2 3 4 3 2 2 2 3 2 3 2 2 2 2 1 2 2 2 3 1 2 2 2 2 1 0 2 2 8 70
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe06g00332 Bpe_Chr06 FPKM 0.0 0.271869 0.0 0.0 0.152915 0.40988 0.465036 0.0 0.109631 0.0