Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00341 ATGGAGACAAGACCATCTTTTTTCATTCAAAGAAATGGTGCGGAGAAAATTAATTGCAGTGGGCAATCTGTTATTCTTCCTTCCTTAATATCAGTCCAAGAAACATATCCTAAGTTTCCTAACTCTCAACATGTTCTGATGGAAAGAGAACTTGTTACAAAGCCGCTCAACCACGGCTGTCTTTTACCCTCAGACAGTGGGATAATTGATCACATGTTTTCACCATCCGTTGGATTTACAATGGACGGTCATGTTGTTTCACCTCAGGGAGAACATTCCAAAGTCTCTCTTTCTGCTTCACGGATATCGACAAATGGAGTGCTACCACATTCTCATCGTGGAATACTTCCATCTACAGCATCAGGTCATCATGGCAAAGAAAATAACGTGGCCTGGTGTACAGATGTATTTTCAAGTTTTCTAGATCTTCCTGTAAATACCCCTGTTATAGGAGATAGTCAGGTAGAGAGCAGCAAGGGTGTGGATTTGATGCAATCCGAGGAATTTAGCAAAGAAAGTGTGTGGCAAGACTGGGCAGATCAGCTAATAACTGATGATTCTATGACTTCTGACTGGAATGAGATCTTAGCTAATACTGACATTGCAGAGTTGGAACCAAAGATGGCATACCAGGTTTCTAAACCATCACCAAGTTTCCGAGATTGCTCACGAGTTCTTTCTTCTTCAGGAGAAAGACAGATTGTTTTCCCTCCCAATTCCTTAGCAAATAGTGTCTCGAACAAGTCACGTATGCGATGGACACCAGAACTTCATGAGGCATTTGTGGACGCTGTGAACCAACTTGGTGGTGGTGAAAGAGCGACTCCAAAGGGTGTTTTGAAGCTCATGAAAGTTGGAGGTCTGACAATTTATCATGTGAAAAGCCATTTACAGAAATATAGAACAGCTAGGTTCAGACCTGATTCCTCTGAAGGTTGTCCTAGAGTTGTTGGAGACGAAGAAAACTTCGATGCTGATGATTTCGATGATGAATTTCCTATCGATAATCATAACCACAACGCCTCTAATGGCCGCTCTGTTAACGATTCTGTAAATACATTTAGAAAACGAGAATTTAAAGCGACAACAATTGCATCAAAATGGCCTCAATTCCTTCTCCATTGCCAGCAGTGGTATCGATTTTGTTCTACACCAGTTCTGCAGATTCATCTTAAGTTAGTTTACTTATTTTTTAGTTCTTTTCGTTATATGCTTTTAGTAAATGGCAAGGACTTAGAAGGTGACAGAGAGTTCTACAGCAATGCTGAATGGAAGGAGAGAGTAGAGAAATGGAAAGTCAGGCAAGAGAAAAAAGGTTTGATGAGCAAAGATGGTGGAAATAATGATCAAGGAGAAGAAGATGACTATCTTATGGCGGAAGCTCGACAACCTCTATGGCGAAAAGTTCCGATATCATCGAGCAAAATCAGCCCTTATCGTATAGTGATTATACTACGGCTGATCATTCTTGCTTTCTTCTTACGATTTCGCGTATTAACACCAGCTTATGATGCATATCCCTTATGGCTTATCTCTGTTATATGTGAAATATGGTTTGCCTTCTCTTGGATACTTGATCAATTTCCGAAATGGTTCCCCATAAATCGGGAAACTTACTTGGATCGTTTGTCGATGAGGTTTGAGCGTGAAGGCGAACCGAATAGCTTAACTCCTGTCGATTTCTTTGTCAGCACTGTCGACCCTCTAAAGGAGCCGCCGATTATAACAGCCAACACTGTCCTGTCAATACTGGCCGTTGATTATCCGGTCGATAAGGTCAGCTGCTATGTGTCCGATGATGGTGCTTCGATGCTGTTATTCGACACGCTATCGGAAACTGCTGAATTTGCAAGAAGATGGGTGCCATTTTGCAAAAAGTATAGTATTGAGCCAAGGGCTCCTGAGTTTTACTTCTCTCACAAGATTGATTACTTGAAAGATAAGGTGCTTCCAAGCTTTGTGAAGGAGCGCAGAGCTATGAAAAGGGAATACGAGGAGTTCAAAGTTAGAATCAATGCATTAGTGGCAAAGGCTCAAAAGAAACCGGAAGAAGGATGGGTTATGCAGGATGGCACGCCCTGGCCGGGAAATAATACTCGGGATCATCCCGGCATGATTCAGGTGTATCTGGGAAGTGCCGGAGCTTTAGACGTGGAGGGAAAAGAACTCCCGCGCCTTGTGTATGTTTCACGTGAAAAACGACCTGGATATCAACATCATAAGAAAGCTGGTGCTATGAATGCCCTTGTTCGAGTCTCAGCTGTTCTTACAAACGCGCCTTTCATTTTGAATCTTGACTGTGATCACTATGTCAACAACAGTAGAGCAGCGAGGGAAGCCATGTGCTTTCTAATGGATCCTCAGCTTGGGAAGAAACTATGCTATGTCCAATTTCCTCAAAGATTCGATGGTATTGACCGTCACGATCGATATGCAAATCGAAACATCGTCTTCTTCGATATTAACATGAGAGGGCTTGATGGACTCCAAGGTCCGGTTTATGTCGGAACTGGATGTGTCTTTAACAGGCAAGCTTTGTATGGCTACGATCCCCCGGTGTCCGAAAAGCGGCCGAAGATGACATGTGATTGCTGGCCTTCATGGTGCTGCTGTTGTTGCGGAGGTTCGAGGAAGTCGAAATCAAAGAAAAAAGGAGAGAAAAATTTGCTTGGAGGACTACATACTAAGAAGAAGAAAATAATGGGAAAGAACTACACAAGGAAAGGGCATGGACCCATGTTTGATCTCGAAGAAATCGAAGAAGGGCTCGAAGGTTTTGACGAATTGGAAAAGTCATCGCTCATGTCACAGAAAAACTTCGAGAAACGATTCGGGCAGTCGCCCGTTTTCATCACTTCGACACTCATGGAAGACGGTGGCCTTCCGGAAGGAACAAACAACACATCACTTGTCAAGGAGGCCATTCATGTCATAAGCTGTGGATATGAAGAGAAAACAGAATGGGGAAAAGAGATTGGCTGGATTTATGGTTCAGTTACAGAAGATATTTTAACTGGTTTCAAGATGCATTGTAGAGGATGGAAGTCGGTTTACTGCATGCCAAAACGACCAGCGTTCAAAGGGTCGGCTCCGATAAATCTCTCCGATCGACTTCACCAAGTTCTTCGATGGGCTCTTGGCTCTGTTGAAATTTTCCTTAGCCGACATTGCCCGCTCTGGTATGGCTATGGCGGCAAATTGAAATGGTTGGAGAGGCTTGCTTATATTAACACCATCGTCTACCCTTTTACGTCTATTCCTTTACTTGCTTACTGCACTGTTCCGGCAGTTTGTCTCCTCACCGGAAAATTCATCATCCCCACTTTGACAAACCTAGCTAGTGTATGGTTCATGGCTCTCTTCCTCTCCATCATAGCAACTGGCATCCTAGAGCTCCGATGGAGTGGTGTCAGTATCGAAGATTGGTGGCGAAACGAGCAATTCTGGGTTATTGGCGGTGTCTCCGCCCATCTTTTTGCTGTTTTTCAAGGTTTGCTCAAAGTTCTCGCCGGAGTTGATACCAATTTCACCGTCACGTCGAAAGCAGCTGATGATGCCGAGTTTGGTGAGCTTTACCTCTTCAAATGGACGACGCTTCTCATCCCTCCGACCACTCTCATAATCCTGAACATGGTTGGAGTCGTGGCCGGAGTTTCTGAAGCCATTAACAACGGCTACGGCTCGTGGGGACCTCTGTTCGGAAAACTATTCTTCGCCTTCTGGGTTATCGTTCATCTCTATCCTTTCCTGAAAGGTTTAATGGGAAGACAAAACAGGACTCCCACCATTGTTGTTCTTTGGTCTGTTCTTCTTGCATCAATTTTTTCATTGGTTTGGGTCAGAATTGATCCTTTCTTGCCTAAACCCACTGGTCCTCTCCTCAAACAATGTGGAGTTGAGTGCTAA 3906 43.75 METRPSFFIQRNGAEKINCSGQSVILPSLISVQETYPKFPNSQHVLMERELVTKPLNHGCLLPSDSGIIDHMFSPSVGFTMDGHVVSPQGEHSKVSLSASRISTNGVLPHSHRGILPSTASGHHGKENNVAWCTDVFSSFLDLPVNTPVIGDSQVESSKGVDLMQSEEFSKESVWQDWADQLITDDSMTSDWNEILANTDIAELEPKMAYQVSKPSPSFRDCSRVLSSSGERQIVFPPNSLANSVSNKSRMRWTPELHEAFVDAVNQLGGGERATPKGVLKLMKVGGLTIYHVKSHLQKYRTARFRPDSSEGCPRVVGDEENFDADDFDDEFPIDNHNHNASNGRSVNDSVNTFRKREFKATTIASKWPQFLLHCQQWYRFCSTPVLQIHLKLVYLFFSSFRYMLLVNGKDLEGDREFYSNAEWKERVEKWKVRQEKKGLMSKDGGNNDQGEEDDYLMAEARQPLWRKVPISSSKISPYRIVIILRLIILAFFLRFRVLTPAYDAYPLWLISVICEIWFAFSWILDQFPKWFPINRETYLDRLSMRFEREGEPNSLTPVDFFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKYSIEPRAPEFYFSHKIDYLKDKVLPSFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAVLTNAPFILNLDCDHYVNNSRAAREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMRGLDGLQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKSKSKKKGEKNLLGGLHTKKKKIMGKNYTRKGHGPMFDLEEIEEGLEGFDELEKSSLMSQKNFEKRFGQSPVFITSTLMEDGGLPEGTNNTSLVKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKWLERLAYINTIVYPFTSIPLLAYCTVPAVCLLTGKFIIPTLTNLASVWFMALFLSIIATGILELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTSKAADDAEFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSEAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLVWVRIDPFLPKPTGPLLKQCGVEC 1301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14838221 14845580 - Bpe019839.3 Bpe06g00341 105279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00341 1301 Gene3D - 247 306 - -
Bpe06g00341 1301 Pfam Cellulose synthase 559 1293 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bpe06g00341 1301 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 304 1301 - -
Bpe06g00341 1301 SUPERFAMILY Homeodomain-like 246 302 IPR009057 -
Bpe06g00341 1301 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 248 302 IPR006447 GO:0003677
Bpe06g00341 1301 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 304 1301 - -
Bpe06g00341 1301 Coils Coil 657 677 - -
Bpe06g00341 1301 SUPERFAMILY Nucleotide-diphospho-sugar transferases 572 1114 IPR029044 -
Bpe06g00341 1301 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 667 851 IPR029044 -
Bpe06g00341 1301 Pfam Myb-like DNA-binding domain 250 301 IPR001005 -
Bpe06g00341 1301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 247 305 IPR017930 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00341 Bpe-Chr6:14838221 Bpe13g01174 Bpe-Chr13:17147738 0 dispersed
Bpe11g01303 Bpe-Chr11:9751922 Bpe06g00341 Bpe-Chr6:14838221 2.40E-46 dispersed
Bpe02g00278 Bpe-Chr2:1866590 Bpe06g00341 Bpe-Chr6:14838221 0 transposed
Bpe11g01127 Bpe-Chr11:8410840 Bpe06g00341 Bpe-Chr6:14838221 0 transposed
Bpe10g00304 Bpe-Chr10:10515677 Bpe06g00341 Bpe-Chr6:14838221 8.52E-152 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21555 PF03552 Cellulose_synt 0 CL0110 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00341 K10999 - jre:108996010 1650.95