Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00416 ATGGAGAATGACCCTTTCTTCAGCGCCAGACACCCGCCGCCGTCTCGGACGGCGTTTGAATCAACTTCTGCGATGTCTGTTTGGCAGCAACTAGCTCCGGTGCCGAACTGCTCGCAGGAGAAATCCACTGGCTACTTTCTCAACCCGAGTACACACTTCGATTCGGCTCTCTGTTCCATCGTCCCTTCGCTGGAGGTATCGAATTCTAATGTCTCCGGCGAAGGGCTTAGGATTAGGGAACTGATAGGGACGCTCGGAAAAAATCCGAATTATTGCACTTCTTTGAGCTCACATCCGAAGCTTAATTCTCCATTAATCGCGGCAAATTCTAATGTAGCGGAATTCTCAGGTGATCCTGGATTTGCAGAGAGGGCTAGGTTTTCTTGCTTTGGAAGTAAGAGTTTTAATGGTCAAACCGGTCAGTTTCCTTCTCACAGCTCTACACCATTAATGGCGGACGGAAAGATTTCTCGAGTTTCAAGCAGTCCATCTCTCAAAGCATTTGGATCGACTCACCCAATGGAATCCACATTCTCAGAAACAATCTCAAACGACTTAAATTGCAGAAAAAGAAAAGCAAATTCAAAGGGAAAGCCGAAAGAACTCGTGAATGAAGTTAACGAGCATTTAAATGGAAAACGGTGCAAAGTGAACGAAAAGAACAGGTGTGGAAATGGCGGCGACAGGACAGAGCAAGAAGGCGGCCATGGAAAAAGCTCTGCAAATGAAGAGAAGACAACCAAGACGAAGAGCAACCCTAAACCTCCAGAGCCTTACAAAGACTACATTCATGTCCGAGCAAGAAGGGGCCAAGCCACTGACAGCCATAGCCTTGCAGAAAGAGTTAGGAGAGAGAAGATAAGTGAAAGAATGAAGCTTCTTCAAGATCTCGTTCCAGGCTGCAACAAAGTCACCGGAAAAGCACTAATGCTCGACGAAATAATAAACTATGTTCAGTCATTGCAACGTCAAGTAGAGTTCCTTTCCATGAAGTTGGCTTCTGTCAACACCCGGTTGGAATCCACCGTGGATTCTCCGAGCTCCAAAGAAGTAAGCTTTTTCAAAATTTGTTTTTTTGTAATTTTTCGTTGA 1092 45.51 MENDPFFSARHPPPSRTAFESTSAMSVWQQLAPVPNCSQEKSTGYFLNPSTHFDSALCSIVPSLEVSNSNVSGEGLRIRELIGTLGKNPNYCTSLSSHPKLNSPLIAANSNVAEFSGDPGFAERARFSCFGSKSFNGQTGQFPSHSSTPLMADGKISRVSSSPSLKAFGSTHPMESTFSETISNDLNCRKRKANSKGKPKELVNEVNEHLNGKRCKVNEKNRCGNGGDRTEQEGGHGKSSANEEKTTKTKSNPKPPEPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLESTVDSPSSKEVSFFKICFFVIFR 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15556085 15557521 - Bpe019919.1 Bpe06g00416 105354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00416 363 PANTHER BHLH TRANSCRIPTION FACTOR 182 350 - -
Bpe06g00416 363 MobiDBLite consensus disorder prediction 217 260 - -
Bpe06g00416 363 Pfam Helix-loop-helix DNA-binding domain 275 322 IPR011598 GO:0046983
Bpe06g00416 363 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 182 350 IPR024097 GO:0006355
Bpe06g00416 363 SMART finulus 277 327 IPR011598 GO:0046983
Bpe06g00416 363 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 271 321 IPR011598 GO:0046983
Bpe06g00416 363 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 24 112 IPR024097 GO:0006355
Bpe06g00416 363 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 269 338 IPR036638 GO:0046983
Bpe06g00416 363 PANTHER BHLH TRANSCRIPTION FACTOR 24 112 - -
Bpe06g00416 363 CDD bHLH_AtBPE_like 261 345 - -
Bpe06g00416 363 Coils Coil 318 338 - -
Bpe06g00416 363 Gene3D - 268 345 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00416 Bpe-Chr6:15556085 Bpe13g00756 Bpe-Chr13:14089584 8.22E-71 dispersed
Bpe13g00187 Bpe-Chr13:9819148 Bpe06g00416 Bpe-Chr6:15556085 2.53E-45 dispersed
Bpe13g01167 Bpe-Chr13:17101286 Bpe06g00416 Bpe-Chr6:15556085 9.10E-24 dispersed
Bpe12g00693 Bpe-Chr12:12509573 Bpe06g00416 Bpe-Chr6:15556085 4.80E-35 transposed
Bpe10g00365 Bpe-Chr10:11243759 Bpe06g00416 Bpe-Chr6:15556085 2.10E-170 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21560 PF00010 HLH 2.40E-06 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00416 - - zju:107426586 344.739