Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00419 ATGGAAACAACCTCTATAAGATGTCTTCTCAACAGTATTTCTCGATTCATTCATCTGGTTTCTTCTCGAAAAATAAAGTTCATATCTATCCAGGAAGATTACAAAGATATGGTTGGTGTATTAAAGCTATTGAAACCCGTACTTGATGATGTCGTTGATTATAAAATTATTTCAGATGATTTACTTTACAAAGAGTGTGAAGTATTGGATGTTGTGGTTAACGAAGCACGAGAGTTTATGGAAAACTGGGGACCAAAGACGAGCAAAATTTGCAGTGTTTTGCAGAGTGATTCATTGTTGATGAAAATTCGAAATTTGTCGCTAGAAATTTGTCAGATACTCTATAAATTGTTACAATCATCTCCATCTAGTTCAAGTTTAACAGCTGTTGAGCGATGCCTGCAAAGCCTTAAATTTTTCTCTAAGCAAGAAAGAGCATCTGAGTATATAAGAGAGGCTCTAAGAAGACAAAGAGATGATAATGGCCAAAGCACTGGACATCTTGAAAAAATCATTGAACTTCTGTGTTTGAAATCGAGTCAGGAACTTTTGAAGGAGAGTATTGCTGTGGAAAAAGAGAGAATGAATGCCAAAGTTAATGAAGCAAAGGGAGAAACAAGTCAAATGGACCAAATTGTGGCTTTTATTGGCAGCATACGCGATTGGATGGCTGGAACCGATCAGTATCAGGGGATTATTCAGGTTCCAATTCCTTCATATTTCCGATGTTCTTTATCGTCGGAGTTGATGTTGGATCCTGTGATTGTGGCATCAGGTCAAACATTTGATAGATATTCCATTCAAAAGTGGCTTGATAATGGACTAACCATATGCCCAAAAACTCATACGGTACTCTGTCATACCAACCTCACTCCTAATTATACTGTCAAGGCCATGATAGCAAATTGGTGTGAGGAAAATAATATAAATTTGCATAACTTGGAGCGGAATTTTGTTTCTATCTCATCACCACCCATCGCTGTATCACAGCGAGATTCGATCCAGACTGATAGTCATTTTTCTTTGACCAATAGTAATTTCACTGCACAATCGTCAATCGAAGTTGGAAATGTCAATGAGAAGCAAACTGTAGGCATCTCCTCTCAATTGGGTGGAGAAAATTTGAAAGACGCCGTAGAGAAGAGCGACCACTCGTCCCATGGGCAGTCATATGCGCATAGTGGGAGTGGATCGGCTTCTAGTGCCATTTCGAGCACTGACTATGTTTCTTCTGCTCTGAATGAGGTATTGAGGATATCTAATACGGAGGATTATGGAAGCGAGTTGTCTGGGGAAATCAAATCTGAGAATCCTATTGCTTATTCTCAACAGGACTCGGGAATCTCTCGGCAGTTAGTTGGAGAAAGCTTGCAGAGCCGAAAAAAGGAAGTGGACATGGCAGAGAATGGAAAGTATAACTATAAGAGAGGCAGTTCCCTTCCAAATTCAACTGCGGCCCGTGATGAGTTGACGACAACTTCCCATGTCAATGACTTGATTGTCGACCTCAAGAGCCAAAGGAAAGAAGTGCAAACTAATGCTGCCGAAGAATTGCGGCTTCTAGCAAAGCACAATATGGAAAATCGCGTGATTATAGGAAAATGTGGAGCTATTGTGCCTTTACTTTCACTTTTATATTCAAAAGTGAAGTTAACGCAGGAGCATGCTGTGACTGCTCTGTTAAATCTTTCCATTGATTTAAATAATAAGGCAATGATAGCTGATTCAGAAGCTATAGAACCACTTATTCATGTTCTGAAGACGGGAAATGACGTGGCCAAAGAGAATTCGGCAGCAGCTCTATTCAGCCTATCTGTATTAGAAGAATACAAGGCAAAAATTGGTCGTTCTGATGCGGTTAGAGCTTTGGTAGATCTTCTGGGTTCGGGTAGTCTCAGAGGAAAGAAGGATGCTACAACTGCTCTTTTTAATTTGTCCATTTTTCATGAAAATAAGGCTCGAATTGTTCAAGCCGGAGCGATAAGGTACCTTGTCGAGTTTTTAGACCCGTCAACTGGGATGGTCGACAAGGCTGCTGCTCTGTTAGCTAATTTGTCAACCATTTCAGAAGGGCGTTTGGCAATTGCGCGAGAAGGGGGTATTCCATTATTAGTTGAACTTGTCGACACTGGATCCCTTAGCGGTAAGGAAAATGCTGCCTCCATACTTTTACAGCTATGCCTTCATAGTTCAAAGTTTTGTACTTTGATTCTGCAAGAAGGTGCAGTTCCACCTCTGGTTGCCTTATCACAGTCCGGGACTCCTCGTTCCAAAGAAAAGGCACAACAGCTTCTCAGCCACTTTCGGAATCAGCGGGAAGGAGGATCTGGGAAAGGAAAATCGTGA 2346 40.96 METTSIRCLLNSISRFIHLVSSRKIKFISIQEDYKDMVGVLKLLKPVLDDVVDYKIISDDLLYKECEVLDVVVNEAREFMENWGPKTSKICSVLQSDSLLMKIRNLSLEICQILYKLLQSSPSSSSLTAVERCLQSLKFFSKQERASEYIREALRRQRDDNGQSTGHLEKIIELLCLKSSQELLKESIAVEKERMNAKVNEAKGETSQMDQIVAFIGSIRDWMAGTDQYQGIIQVPIPSYFRCSLSSELMLDPVIVASGQTFDRYSIQKWLDNGLTICPKTHTVLCHTNLTPNYTVKAMIANWCEENNINLHNLERNFVSISSPPIAVSQRDSIQTDSHFSLTNSNFTAQSSIEVGNVNEKQTVGISSQLGGENLKDAVEKSDHSSHGQSYAHSGSGSASSAISSTDYVSSALNEVLRISNTEDYGSELSGEIKSENPIAYSQQDSGISRQLVGESLQSRKKEVDMAENGKYNYKRGSSLPNSTAARDELTTTSHVNDLIVDLKSQRKEVQTNAAEELRLLAKHNMENRVIIGKCGAIVPLLSLLYSKVKLTQEHAVTALLNLSIDLNNKAMIADSEAIEPLIHVLKTGNDVAKENSAAALFSLSVLEEYKAKIGRSDAVRALVDLLGSGSLRGKKDATTALFNLSIFHENKARIVQAGAIRYLVEFLDPSTGMVDKAAALLANLSTISEGRLAIAREGGIPLLVELVDTGSLSGKENAASILLQLCLHSSKFCTLILQEGAVPPLVALSQSGTPRSKEKAQQLLSHFRNQREGGSGKGKS 781
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15581888 15584836 - Bpe019922.1 Bpe06g00419 105357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00419 781 Pfam U-box domain 237 308 IPR003613 GO:0004842|GO:0016567
Bpe06g00419 781 SUPERFAMILY RING/U-box 232 311 - -
Bpe06g00419 781 MobiDBLite consensus disorder prediction 388 403 - -
Bpe06g00419 781 CDD RING-Ubox_PUB 241 282 IPR045210 -
Bpe06g00419 781 SMART arm_5 648 687 IPR000225 GO:0005515
Bpe06g00419 781 SMART arm_5 607 647 IPR000225 GO:0005515
Bpe06g00419 781 SMART arm_5 688 728 IPR000225 GO:0005515
Bpe06g00419 781 SMART arm_5 525 565 IPR000225 GO:0005515
Bpe06g00419 781 SMART arm_5 566 606 IPR000225 GO:0005515
Bpe06g00419 781 SUPERFAMILY ARM repeat 487 768 IPR016024 -
Bpe06g00419 781 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 618 660 IPR000225 GO:0005515
Bpe06g00419 781 MobiDBLite consensus disorder prediction 377 403 - -
Bpe06g00419 781 MobiDBLite consensus disorder prediction 752 781 - -
Bpe06g00419 781 ProSiteProfiles U-box domain profile. 236 310 IPR003613 GO:0004842|GO:0016567
Bpe06g00419 781 PANTHER U BOX DOMAIN-CONTAINING 7 776 - -
Bpe06g00419 781 SMART Ubox_2 240 303 IPR003613 GO:0004842|GO:0016567
Bpe06g00419 781 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 226 317 IPR013083 -
Bpe06g00419 781 MobiDBLite consensus disorder prediction 464 485 - -
Bpe06g00419 781 Gene3D - 478 774 IPR011989 -
Bpe06g00419 781 Pfam Armadillo/beta-catenin-like repeat 527 564 IPR000225 GO:0005515
Bpe06g00419 781 Pfam Armadillo/beta-catenin-like repeat 609 646 IPR000225 GO:0005515
Bpe06g00419 781 Coils Coil 185 205 - -
Bpe06g00419 781 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 659 700 IPR000225 GO:0005515
Bpe06g00419 781 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 3 7 776 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00419 Bpe-Chr6:15581888 Bpe15g00315 Bpe-Chr15:14650719 2.32E-143 dispersed
Bpe06g00419 Bpe-Chr6:15581888 Bpe06g00004 Bpe-Chr6:76505 2.33E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00419 - - pvy:116109506 924.85