Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00431 ATGACTGGTTCTGGTTCTCCCTGCGGAGCCTGCAAGTTTTTAAGACGAAAATGTGTTCGAGGCTGTGTTTTTGCTCCTTATTTCTGCCATGAACAAGGAGCTTCTCACTTTGCAGCCATTCACAAGGTTTTCGGAGCTAGCAATGTTTCCAAGCTTCTTGCCCATCTTCCTGTTTCTGATCGCTGCGAAGCTGCCGTTACCATCGCCTACGAAGCTCAAGCTCGCCTGCAAGACCCTATTTATGGCTGCGTTTCGCATATTTTCGCTCTTCAACAGCAGGTCGTCAATTTGCAGGCGCAACTATCTTCTTTGAAAGAACATGCTGCCCAGAGCGTATTCAACAGTTCTGCTGCTGAAAACCCTAGTCAAATTTTATTCGGGAAATTTCCTTCTCCCCCGCAGGATCTTTCAAATTGGATGAAGTTGGAAAACTCAACTGAAATGTCACAATTGCATCAAAATATCTGCCATGGCAGCGCTCCTATGCCTTTCTATAATGAGAAGTCTGTCATGGATTCTTACCCTTTGGAGAATTTAGTCGTTCCAGAAAAGAATCTCAGCTTCGGTGAGACCTCTAATTCAATATCTTCTTATGAAATGCAAACAAGCAATAGGCAGGAATGGAGTTTCCAAGATGCAGACGAGCTTCAGTTCACGGCTTTCGGCTACTTCCACCATTGA 681 44.79 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGASHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTIAYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLSSLKEHAAQSVFNSSAAENPSQILFGKFPSPPQDLSNWMKLENSTEMSQLHQNICHGSAPMPFYNEKSVMDSYPLENLVVPEKNLSFGETSNSISSYEMQTSNRQEWSFQDADELQFTAFGYFHH 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15701204 15701970 + Bpe019935.1 Bpe06g00431 105369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00431 226 Coils Coil 87 107 - -
Bpe06g00431 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 225 - -
Bpe06g00431 226 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Bpe06g00431 226 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 225 - -
Bpe06g00431 226 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe06g00431 Bpe10g00374 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00906 Bpe-Chr3:28789928 Bpe06g00431 Bpe-Chr6:15701204 2.97E-53 dispersed
Bpe05g00910 Bpe-Chr5:22116210 Bpe06g00431 Bpe-Chr6:15701204 8.59E-52 dispersed
Bpe05g00911 Bpe-Chr5:22121456 Bpe06g00431 Bpe-Chr6:15701204 1.93E-56 dispersed
Bpe06g00431 Bpe-Chr6:15701204 Bpe09g00327 Bpe-Chr9:3009051 2.59E-69 dispersed
Bpe10g00374 Bpe-Chr10:11320668 Bpe06g00431 Bpe-Chr6:15701204 3.50E-135 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21564 PF03195 LOB 2.00E-36 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00431 K13945 - vvi:100266975 302.367