Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00434 ATGGAAGAGGTTGAGGAGGCTAACAAAGCAGCTGTTGAAAGCTGCCATAGATTATTAAGTCTATTTACTCAACCCCAAGACGAAGTACAGTACAGAAGTTTGATGGTGGAAACTGGGGAAACTATTTCTAAGTTTAAGAAAGTTGTATCTATTCTGAACATTGGTTTGGGCCATGCAAGAGCCAGAAAACTCAAGAAAATCCATACTCCTTTTCCTCAGACCATCTTTTTAGACAACCCTTATTCCAGATTAGACCATCCAAACAAAACCCTCCAGCTTGATTCTGTGTGCCTAGGAACCTCATCTTTGGAGTTGAGCTCAAATGGGAAAACTCCTCTTCAACTTTCTCAGCAAACACCCCCTTCCCACTATCACTTCCTTCATCAACAGCATCAACAGAGGTTGTTTCTACAACAGCAGCAGATGAGTAATCAACAGGCAGAAATGATGTTTCGTCGGAGTAACAGTGCCTTAAACTTGAACTTTGATGGGTCTACTTGCACACCGACGATGTCATCGACGAGGTCCTTCATTTCTTCGCTGAGCGTTGATGGAAGTGTGGCCAATTTAGAAGGAAATGCCTTCCATTTGATTGGGGCTGCTCGTTCTTTGGACCAGACATCACAGCATAAGAGGAAGTGCTCTGCAAGGGGAGATGATGGGAGTGTTAAATGCGGAAGTAGTGGTAGATGCCACTGCTCCAAGAAGAGGAAACATAGGGTGAAAAGATCAATTAAAGTACCCGCCATTAGCAACAAGCTTGCTGATATTCCTCCTGATGATTATTCATGGAGAAAATACGGCCAGAAGCCCATTAAGGGTTCTCCTCACCCAAGGGGGTATTATAAGTGTAGCAGCATGAGAGGTTGCCCGGCAAGGAAGCACGTGGAAAGATGCTTAGAAGACCCGACGATGCTCATAGTTACCTATGAAGGAGAGCATAACCATGCTAAGGTACCTTTGCAATCTGCAAATACTTGA 981 44.14 MEEVEEANKAAVESCHRLLSLFTQPQDEVQYRSLMVETGETISKFKKVVSILNIGLGHARARKLKKIHTPFPQTIFLDNPYSRLDHPNKTLQLDSVCLGTSSLELSSNGKTPLQLSQQTPPSHYHFLHQQHQQRLFLQQQQMSNQQAEMMFRRSNSALNLNFDGSTCTPTMSSTRSFISSLSVDGSVANLEGNAFHLIGAARSLDQTSQHKRKCSARGDDGSVKCGSSGRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPTMLIVTYEGEHNHAKVPLQSANT 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15726359 15728027 - Bpe019938.1 Bpe06g00434 105372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00434 326 Pfam WRKY DNA -binding domain 260 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe06g00434 326 ProSiteProfiles WRKY domain profile. 253 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe06g00434 326 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 97 - -
Bpe06g00434 326 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 107 326 - -
Bpe06g00434 326 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 97 IPR044810 GO:0003700
Bpe06g00434 326 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 107 326 IPR044810 GO:0003700
Bpe06g00434 326 Gene3D WRKY domain 244 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe06g00434 326 SMART WRKY_cls 258 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe06g00434 326 Pfam Plant zinc cluster domain 211 256 IPR018872 -
Bpe06g00434 326 SUPERFAMILY WRKY DNA-binding domain 256 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00434 Bpe-Chr6:15726359 Bpe02g01076 Bpe-Chr2:13674350 3.18E-28 dispersed
Bpe14g00545 Bpe-Chr14:4729242 Bpe06g00434 Bpe-Chr6:15726359 1.14E-58 dispersed
Bpe10g00378 Bpe-Chr10:11362242 Bpe06g00434 Bpe-Chr6:15726359 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21565 PF03106 WRKY 2.80E-26 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00434 - - pop:7476889 499.975