Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00444 ATGGAGAATAATCCGTATGAGGTCGCGACCGACGATTTCTTAGAGCAAATTCTTGGTATTCCTGCTTTCCCGCCGAATGAATCAAGCTTGGCAGGAAATGATGGTGGATTTTCAGGAGCTGTGGCTCACGGTTCGATGAGGCTGCAGCTCAGCTCGGGGGACGGCTCTTGCCACACGGCCTGCGTTGGTGGAAGAAGCGATGGGGGCGCAGGGTTTCGTAACCCTGGTTTCCCCTTGGGGTTGAGCTTGGATCAGGGAAAGTGTGGGTATCTGAAGCCTGAGGAGGCATCCGGTAGCGGCCCACGGTTCTGCGGCGAGGTCGTCGATGACTTTTTGCCTGTAGTTTTCCAAGCCCCACCGATTACCAACAATGTTAATGGAGCGCCATATCCTCCGGCAATGCGGCCAAGAGTTCGAGCTAGACGAGGACAAGCTACAGATCCCCATAGTATTGCTGAGAGGTTACGCAGGGAAAGAATTGCAGAGAGAATCAGGGCATTGCAGGAACTGGTTCCTAGTGCAAACAAGACAGATAAAGCTGCGATGCTCGATGAAATAGTAGATTATGTGAAGTTCCTGCGACTCCAAGTGAAGGTTTTGAGCATAAGTAGACTGGGAGGTGCTGGGGCCGTGGCTCCTCTTATAACAGACATTTCATTATTATCACTGAAGGAAAATGGAAGTGCAGGTGGAAGAAACCGACCCGCCTGGGAGAAGTGGTCAGATGAATGCACAGAAAGACAAGTTGCTAAGTTAATGGAAGAAAATGTTGGTGCTGCTATGCAATTTCTTCAATCCAAGGCCATTTGTCTCATGCCTATCTCTTTAGCCTCCGCAATCAACCACACGAAGCCAGCTGACTCCGGCAGTGTGGTCAAGCCAGAGTCAAACCCTCCTTACTAG 903 50.72 MENNPYEVATDDFLEQILGIPAFPPNESSLAGNDGGFSGAVAHGSMRLQLSSGDGSCHTACVGGRSDGGAGFRNPGFPLGLSLDQGKCGYLKPEEASGSGPRFCGEVVDDFLPVVFQAPPITNNVNGAPYPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSANKTDKAAMLDEIVDYVKFLRLQVKVLSISRLGGAGAVAPLITDISLLSLKENGSAGGRNRPAWEKWSDECTERQVAKLMEENVGAAMQFLQSKAICLMPISLASAINHTKPADSGSVVKPESNPPY 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15792577 15795769 - Bpe019947.1 Bpe06g00444 105382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00444 300 Pfam Helix-loop-helix DNA-binding domain 149 193 IPR011598 GO:0046983
Bpe06g00444 300 Gene3D - 139 200 IPR036638 GO:0046983
Bpe06g00444 300 PANTHER TRANSCRIPTION FACTOR UNE12 ISOFORM X1 7 290 - -
Bpe06g00444 300 SMART finulus 150 199 IPR011598 GO:0046983
Bpe06g00444 300 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
Bpe06g00444 300 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 202 IPR036638 GO:0046983
Bpe06g00444 300 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 290 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00444 Bpe-Chr6:15792577 Bpe10g00393 Bpe-Chr10:11477617 1.48E-156 dispersed
Bpe06g00444 Bpe-Chr6:15792577 Bpe11g01332 Bpe-Chr11:9959231 2.57E-89 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21567 PF00010 HLH 4.10E-09 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00444 - - csv:101218718 385.956