Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00456 AAGGATTTTCAGAACTTAGCTGCCGGGATGGATTCTATTAACATTAGAGGGGTTGGCGATATCGCCATATCTAAGAATTCCAATTACCAGGAAGCAAAGCCATCGGATTTGAAGGGGAATGATTCGGGGAGCGTTAGTAATAAAGAGATGGTTTTTCGAGCTGATATGATTGATTTTAAGAACTGGGATATTCAGCTGGAAAAGCACTTGAGCCGGGTTTGGTCGAGGGACAGACAGGCTCCTGCAAAGAAGGAAGATTGGGAGATTGATTTGTCTAAAATGGATATAAGATATGTTATAGCTCCTGGGACTTATGGAATTGTCTACAGAGGAGTTTATGATGGCCAAGATGTTGCAGTCAAAGTGTTGGATTGGGGGGAGGATGGCATTGCCACAGCTGCTGAAATCTCTGCTCTCCGGGCTTCATTTCGGCAAGAAGTTGCTGTTTGGCATAAACTTGACCACCCTAATGTTGCAAAGTTTTATGGAGCTTCAATGGGAACTTCCAATCTGAAAATTCCTGCAAAAAGCACATCTAGTGATGGTCTTAATGCTTTTCCCTCGAGGGCTTGTTGCGTTGTAGTTGAATATCTTCCGGGAGGGACCCTAAAAAACTACTTGATAAGAAATAGGAGAAAGAAACTCGCATTTAAGGTCGTCATTCAACTCGCTTTGGATCTCTCAAGAGGTTTGAGCTATCTCCATTCGAAAAAGATTGTGCACAGAGACATAAAAACAGAAAATTTGTTGTTAGATACTCATAGAACATTGAAAATTGTCGATTTTGGTGTGGCTCGTGTTGAAGCTCAGAATCCACGAGACATGACCGGAGAGACCGGCACTCTTGGCTACATGGCCCCAGAGTTGGATGATATTAATTTTACTGTCTTATTTTACAAGTTTTATATCTTAACATCACTTATTTTATCGGTGCAATTAATATTTAGTTTTGTTCTAATTAAAGAGAGTCAAGTTTTAGATGGTAAGCCTTACAATCGGAAATGCGACGTTTATAGCTTGGGAATATGCTTGTGGGAAACATATTGTTGTGAGATGCCTTATCCCAATCACAGTTTCGCAGAAGTTTCGTCAGCAGTTGTTCGACAGCAGAATTTACGGCCAGAGATACCGAGATGTTGTCCAAGTTCTTTGGCAAACATAATGAAAAAATGTTGGGATGCAAACCCGGAGAAACGACCTGAAATGGACGAAGTCGTGAAGTTGTTGGAAGCAGTCGATACGAGCAAGGGAGGCGGCATGATTCCCGACGATCAGGCATCCACCTGCTTCTGTTTCGGCATCCACCGAGGCCCTTAA 1317 42.29 KDFQNLAAGMDSINIRGVGDIAISKNSNYQEAKPSDLKGNDSGSVSNKEMVFRADMIDFKNWDIQLEKHLSRVWSRDRQAPAKKEDWEIDLSKMDIRYVIAPGTYGIVYRGVYDGQDVAVKVLDWGEDGIATAAEISALRASFRQEVAVWHKLDHPNVAKFYGASMGTSNLKIPAKSTSSDGLNAFPSRACCVVVEYLPGGTLKNYLIRNRRKKLAFKVVIQLALDLSRGLSYLHSKKIVHRDIKTENLLLDTHRTLKIVDFGVARVEAQNPRDMTGETGTLGYMAPELDDINFTVLFYKFYILTSLILSVQLIFSFVLIKESQVLDGKPYNRKCDVYSLGICLWETYCCEMPYPNHSFAEVSSAVVRQQNLRPEIPRCCPSSLANIMKKCWDANPEKRPEMDEVVKLLEAVDTSKGGGMIPDDQASTCFCFGIHRGP 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15942169 15945080 + Bpe019958.1 Bpe06g00456 105394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00456 438 CDD STKc_MAP3K-like 100 409 - -
Bpe06g00456 438 ProSiteProfiles Protein kinase domain profile. 94 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00456 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Bpe06g00456 438 SUPERFAMILY Protein kinase-like (PK-like) 80 410 IPR011009 -
Bpe06g00456 438 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 324 431 - -
Bpe06g00456 438 Gene3D Transferase(Phosphotransferase) domain 1 198 421 - -
Bpe06g00456 438 Gene3D Phosphorylase Kinase; domain 1 82 176 - -
Bpe06g00456 438 SMART serkin_6 94 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00456 438 Pfam Protein tyrosine and serine/threonine kinase 326 409 IPR001245 GO:0004672|GO:0006468
Bpe06g00456 438 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 14 291 - -
Bpe06g00456 438 Pfam Protein kinase domain 102 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00456 438 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 324 431 - -
Bpe06g00456 438 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 14 291 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00456 Bpe-Chr6:15942169 Bpe14g00210 Bpe-Chr14:2350827 0 dispersed
Bpe13g00594 Bpe-Chr13:13053798 Bpe06g00456 Bpe-Chr6:15942169 0 wgd
Bpe14g01203 Bpe-Chr14:8981502 Bpe06g00456 Bpe-Chr6:15942169 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63390 PF00069 Pkinase 9.20E-34 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00456 - - mcha:111018484 648.662