Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00486 ATGTCTTCGTACTGTTTCCTTTTTCTCGCTCTAGGACTGTCCTTTTCGCTTTTTCCTCTCCTTGCTATCTCCCAAAACGACACCGTTCAATGCCCCCTCAACTTATCGATCCTTCGCCGGATCGTCCAGAGCTCTGGGCGCCTTTCCTCCGACGTGGCCATTGAATGCCAGTATATTCGTCAGGGCCTTCGACTCGTGGAGTCCCAATATCTTCAACTCACTGGCTTGTTTCTTCCCCCGGTTAACTCGGCTGAGTCTTGCTGGGACTCGTACCAATCCCTTATTAATGACGATTCCGGATCCAATTTGGATATCCGTCGCTCTTGTGGATTTCAAACCAGCTGGATTTCTCACGGCTGTATGAACATCACTACCAGAGCGGAGTTCGAGAAGATCGTTCCTAAGGAGGTCCTCGATAACGTCGTTGCGAATTGCAATCAATCTCTTGAGAATAGTTCTCCTTGTGCTTCATGTACAACGAGTTTGTCAATCTTGCAGGCATCGTATTTGACGGGATCATCAGTCGGCAACGTATCCGATTGCACTGCGTATCCGTTCATATACGCTGCCGCCTTCGCCAATCCATTTGGTCCTGCCGACAGAGGGACGGCCAAATGCTTGTTCTCCTTGGATTTTTCATCCTCCGAGTCGAAAAACAAGAGGCGGAAGGTGATGATTTTAGGGATTTGCATTGGCTGTGGAATTGGGATCCTAATAGTGATTCTGGGGAGCTGGTTTTCATGGCGGAAAATGAGGGCATGGAGGAAGGAAAGGAGAAGGAGGGACGAAATACAGAGAGTAGAGACGAGTTTAGCCTCTGGATTGGAGTCGATTTCTGACAGCACAACTCTGGTGAGATTCACTTACGAAGAAATCAAGAAAGCAACGAAGAATTTCTCCAGGGACTGTATAATTGGAAAAGGAGGGTATGGCAATGTCTACAAGGGCGTGTTGGAAGACGGCTCAGAAGTAGCCATGAAGAGGTTCAAGAATTGCTCTGCTGCAGGCGATGCCAATTTCGCCCACGAAGTGGAGGTCATTGCCAGCATTCGGCACATAAGCCTCGTTAGCTTAAGAGGATATTGCATAGCCACCACTCCTTTCGAGGGCCACCAACGGATAATCGTATGCGATCTGATAAAAAACGGCAGTCTACACGATCATTTATTTGGCCGATTCGATGATAAACTATCTTGGCCAGTCCGACAAAACATTGCCCTCGGGACAGCGAGAGGACTAGCCTATCTGCACTACGGAGCTCAACCAGCCATAATCCACAGAGATATCAAGGCAAGCAATATACTCTTGGACGAAAATTTCGAGCCGAAAGTTGCAGATTTCGGGCTGGCCAAGTTCACGCCAGAAGGAATGACTCATTTGAGCACAAGAGTTGCTGGAACCATGGGTTATCTGGCTCCAGAATATGCTCTATACGGTCAATTAACCGAGAGAAGCGATGTGTACAGCTTTGGAGTGTTACTTCTCGAGCTATTGAGCGGGAGAAAGGCACTCACCATGAATAGTGACCATCAGCCGAGCTTGGTGACCGACTGGGCCTGGACACTGGTGAGGGAAGGAAGAACTCTCGATGTGATCGAAGATGGCATTCCAGATTTAGGCCCTCCCGAGGTGATCGAAAAGTACGTATTAATCTCCGTCCTTTGCTCTCACCCTCAGTTATATGCAAGGCCAACTATGGATCAGGTTGTGAAAATGTTGGAAACGGATTTATCAGTTCCTTCGATTCCGGAGAGGCCTATTCCGATTGTGGCTCATATCGATGATATTGAGAGATCTATGAGTAGCCACGGATCTCTTCATCTCCCCGAGCTCTGCTAG 1839 48.34 MSSYCFLFLALGLSFSLFPLLAISQNDTVQCPLNLSILRRIVQSSGRLSSDVAIECQYIRQGLRLVESQYLQLTGLFLPPVNSAESCWDSYQSLINDDSGSNLDIRRSCGFQTSWISHGCMNITTRAEFEKIVPKEVLDNVVANCNQSLENSSPCASCTTSLSILQASYLTGSSVGNVSDCTAYPFIYAAAFANPFGPADRGTAKCLFSLDFSSSESKNKRRKVMILGICIGCGIGILIVILGSWFSWRKMRAWRKERRRRDEIQRVETSLASGLESISDSTTLVRFTYEEIKKATKNFSRDCIIGKGGYGNVYKGVLEDGSEVAMKRFKNCSAAGDANFAHEVEVIASIRHISLVSLRGYCIATTPFEGHQRIIVCDLIKNGSLHDHLFGRFDDKLSWPVRQNIALGTARGLAYLHYGAQPAIIHRDIKASNILLDENFEPKVADFGLAKFTPEGMTHLSTRVAGTMGYLAPEYALYGQLTERSDVYSFGVLLLELLSGRKALTMNSDHQPSLVTDWAWTLVREGRTLDVIEDGIPDLGPPEVIEKYVLISVLCSHPQLYARPTMDQVVKMLETDLSVPSIPERPIPIVAHIDDIERSMSSHGSLHLPELC 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16121905 16123743 - Bpe019988.1 Bpe06g00486 105424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00486 612 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKF3-RELATED 22 608 - -
Bpe06g00486 612 SUPERFAMILY Protein kinase-like (PK-like) 276 574 IPR011009 -
Bpe06g00486 612 SMART serkin_6 299 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00486 612 Gene3D Phosphorylase Kinase; domain 1 261 378 - -
Bpe06g00486 612 Pfam SPARK 27 178 IPR043891 -
Bpe06g00486 612 ProSiteProfiles Protein kinase domain profile. 299 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00486 612 PANTHER OS01G0750732 PROTEIN 22 608 - -
Bpe06g00486 612 CDD STKc_IRAK 305 574 - -
Bpe06g00486 612 Gene3D Transferase(Phosphotransferase) domain 1 380 580 - -
Bpe06g00486 612 Pfam Protein kinase domain 302 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe06g00486 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Bpe06g00486 612 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00486 Bpe-Chr6:16121905 Bpe07g00019 Bpe-Chr7:97283 9.52E-122 dispersed
Bpe06g00486 Bpe-Chr6:16121905 Bpe03g00601 Bpe-Chr3:26227540 9.21E-83 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63392 PF00069 Pkinase 5.50E-40 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00486 - - qsu:112001569 850.506