Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe06g00495 ATGAGCAGACTGTATTGGACTATAAAAACTTCCTCTGTTTCTCTCCCTCGCTTTCTCTCTTGCTGGAGAGATGAGAGTCGAACGATTTGTGTCTCGGAATATCCCTATTTTGATTTTAGAGCGGTAAATTCGCTGCTGTTCCTTCTTCGAAAGTTCTTTCTATCGTTTTCTACTTTGGGAACGAGAAAGATGAGTTCTCCTGCCGAAGAAGGTGAAGAGTTCAGTTCGAATGTTGGCGATGAGAGCGTTGCCATGTCCATTAGCTCCATCTCTGGTGAGGAAGGCGATTTGTCTCGTGCATTGTGGCGTGCATGTGCTGGAGCTCTGGTTTATGTTCCATGTCCTGGTGACAAGGTGTTCTACTTTCCTCAAGGCCATATTGAACAGGTTGAAGCATTCTGTTCCCAAGGTGGAAGAATTGAAATGCCCATTTATAACTTACCGTCTAAGATCTGTTGCAAAGTTGTCAATGTCCAACTAAAGGCTGACACTCTAACAGATGAAGTTTTTGCTGAGATAACCCTTCTTCCAGAAGCAAAGCAAGAGGAATTTATTCTGGATGAAGAAACGACTCTGTGTTTACACAATAAAAATATTGCTGTCTCCTTTTGCAAGATTTTATCTCCGTCGGACAACAAAATACATAGTGGATTCTCCATACCTAAGAGATGGGCTGATGAGTGTCTGCCACCACTGGACATGTCTCAGAAAATACCAGCACAGGAACTGATTGTGAAGGATTTGCATGGTTCTTTGTGGCACTTTCGCCATATATATCGTGGTGTGCCAAAGCGGCACTTACTTACTAGTGGGTGGAGTGCATTTGTGACTGCAAAGAAACTCGTCTCGGGAGATACGTTGATCTTTCTCAGAGGAGAAAATGGAGAATTTCGTGTTGGAGTTCGCCATGCTAAGCAGAAAAAAGATACATTGCCTTCTGTTGTATCTGGTTATACCATGCAGCATGGCATACTTGCAAATGCTTTACATGCCTTTTCGACTCGGACTATGTTTACTGTGTTCTACCATCCTAGGAGTAGTGCCTCTGAATTTATCATTCCCATAGACTGGTACATGAAGTCGGCTGAACTTGTTTATTCATTGGGAAGAAGATTTACATTTAAGTTTGAAGGAGATGAATATGAAGAAAAGAGATTGGCAGCTACTATTGTTGGTAATGAAGACCTTGATTGCATTAGGTGGCCAGGGTCCGAATGGAGATGTCTCGAGGTACATTGGGATGGTAAGTCAGATAAATATCCATGTCCTGACAGACTTTCACCCTGGAGTATCGAATTAACTGAATCCACCAAGAAGCGTGCTTCAGATATTCTTCAAGCTAAGAAGAGAAAACGAGCACTGTTCGGGTTTTCTAACTTAAATAGAGATGGCATCTCTGATTGTAGATCTACTAGACACAACGAGGTCTTTCAAGGTCAAGAAAATAAGAACCCAACTTCTCCACCGTTGCAACATTTGATATCTGTAGGCAATGATAGAGATATGAACTTGAAAAATCAGCTACTTTTTCATGCCTGCGATCTATGTTGTCGTTGTCAGGAAACCGCAACCTCGTTTCGCCAAAGAAATAATGCTACTCCGATTCTTAGTCATCCATGCCGGATGATGTTTATGCCTTATGAAGCCTTTAAAAGTGCTGAAGTTTGCAAAAATGAGAGGAATGCTAGCTCTAGCAATGCCAGATTCACAAGTTGTCGAGATTTTTCAGGGCTCCCTTCAGAACAAGTCACCACTTGTTTTTCTCCAACTAATTCTCAGTCTCAGGTATCAGGTTCATCCAATAGAAGTTCTCTCTCAAACAGGAGCTGTACAAAGGTAAGTCCCTTAGCCCAATCAAAAGTCGAAGAAAAGACTATCTTCCTGATGATCTAG 1893 42.0 MSRLYWTIKTSSVSLPRFLSCWRDESRTICVSEYPYFDFRAVNSLLFLLRKFFLSFSTLGTRKMSSPAEEGEEFSSNVGDESVAMSISSISGEEGDLSRALWRACAGALVYVPCPGDKVFYFPQGHIEQVEAFCSQGGRIEMPIYNLPSKICCKVVNVQLKADTLTDEVFAEITLLPEAKQEEFILDEETTLCLHNKNIAVSFCKILSPSDNKIHSGFSIPKRWADECLPPLDMSQKIPAQELIVKDLHGSLWHFRHIYRGVPKRHLLTSGWSAFVTAKKLVSGDTLIFLRGENGEFRVGVRHAKQKKDTLPSVVSGYTMQHGILANALHAFSTRTMFTVFYHPRSSASEFIIPIDWYMKSAELVYSLGRRFTFKFEGDEYEEKRLAATIVGNEDLDCIRWPGSEWRCLEVHWDGKSDKYPCPDRLSPWSIELTESTKKRASDILQAKKRKRALFGFSNLNRDGISDCRSTRHNEVFQGQENKNPTSPPLQHLISVGNDRDMNLKNQLLFHACDLCCRCQETATSFRQRNNATPILSHPCRMMFMPYEAFKSAEVCKNERNASSSNARFTSCRDFSGLPSEQVTTCFSPTNSQSQVSGSSNRSSLSNRSCTKVSPLAQSKVEEKTIFLMI 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16189131 16194531 - Bpe019998.1 Bpe06g00495 105433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe06g00495 630 Pfam Auxin response factor 328 409 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bpe06g00495 630 ProSiteProfiles B3 DNA-binding domain profile. 203 305 IPR003340 GO:0003677
Bpe06g00495 630 SMART B3_2 203 305 IPR003340 GO:0003677
Bpe06g00495 630 Gene3D - 366 440 - -
Bpe06g00495 630 Gene3D - 201 304 IPR015300 -
Bpe06g00495 630 PANTHER AUXIN RESPONSE FACTOR 91 577 - -
Bpe06g00495 630 Pfam B3 DNA binding domain 203 303 IPR003340 GO:0003677
Bpe06g00495 630 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 91 577 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bpe06g00495 630 MobiDBLite consensus disorder prediction 586 608 - -
Bpe06g00495 630 CDD B3_DNA 202 302 IPR003340 GO:0003677
Bpe06g00495 630 SUPERFAMILY DNA-binding pseudobarrel domain 191 310 IPR015300 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00495 Bpe-Chr6:16189131 Bpe13g00184 Bpe-Chr13:9759644 1.78E-112 dispersed
Bpe06g00495 Bpe-Chr6:16189131 Bpe05g01038 Bpe-Chr5:22955782 1.93E-112 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21572 PF02362 B3 2.40E-20 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe06g00495 - - qsu:112025629 495.738